Klebsiella michiganensis M1: HR38_17825
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Entry
HR38_17825 CDS
T03349
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kom
Klebsiella michiganensis M1
Brite
KEGG Orthology (KO) [BR:
kom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kom03019
]
HR38_17825
Enzymes [BR:
kom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HR38_17825
Messenger RNA biogenesis [BR:
kom03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HR38_17825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
WHD_HA2
nSTAND3
T2SSE
nSTAND_NTPase5
ResIII
NACHT
DUF6145
PhoH
AAA_16
NTPase_1
SLFN-g3_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
AIE70246
UniProt:
A0AB35PQT4
LinkDB
All DBs
Position
3803868..3807770
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFSSLFERLDGLMLRDKSRFSRRLHGVKKVKNPDAQQAILQEMAQEIEQAAGR
VLLREAARPAIAYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
VKGLIGHTQPRRLAARTVANRIAEELQTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLRELLPRRPDLKIIITSATIDPERFSRH
FNNAPIIEVSGRTYPVEVRYRPIVEDADDTERDQLQAIFDAVDELGRESPGDILIFMSGE
REIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQAHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQ
QTAYKLTPMGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDYLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGLPVNSEPAEYREIHTALLTGLLSHIGMKDADKQEFTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERGQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHVLVEGDWQTRHAFFRENLKLRNEIEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDKWWKQASRETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLTYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYADAFLGRATPLELPLLDSLERELRRMTGVTIDREAW
QWDQVPDHLKITFRVVDEKNKKLQEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIW
SFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPLEQQQEMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCIACGVDKLIDEAGGPVWSEEGFAALHEK
VRAELNETVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKSQMSGLVYRGFVTG
NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESIQQAWQQWLNKLPPQRRQDDD
VQEIRWMIEELRVSLFAQQLGTPYPISDKRVLQAMEQITA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaataaccttctcatcgctctttgaacggcttgatggcctgatg
ctgcgcgataagtcgcgcttctcccgtcgcctgcacggcgtgaagaaggttaaaaatcct
gatgcccaacaggccattcttcaggagatggcgcaagaaattgaacaggcggcagggaga
gtcctgctgcgcgaagccgcgcggccggcgatcgcttatccggaaaacctgccggttagc
cagaaaaaacaggagattctcgaagccgttcgcgatcaccaggtggtgattgtggcgggg
gaaaccgggtcggggaaaaccacccagctgccaaaaatttgtatggagctggggcgcggc
gtgaaaggcttaattggccatacgcagccgcgtcgcctggccgcgcgtaccgtcgccaac
cgcatcgccgaagagctgcaaacggagccgggcggctgcatcggctataaagttcgcttt
agcgaccacgtcagcgataacaccatggttaagctgatgaccgacggtattctgctggcg
gaaatccagcaggaccggctgctgatgcagtatgacaccatcatcatcgatgaagcgcac
gaacgcagcctcaatatcgacttcctgctgggttatttgcgggaactgctgccccgtcgc
ccggatctgaaaattattatcacctcggcgaccatcgatccggaacgcttctcgcgccac
tttaacaacgcgccgattatcgaagtgtccgggcgcacctacccggtagaagtgcgctat
cgacccatcgttgaagacgccgacgacaccgagcgcgatcagctgcaggcgattttcgac
gccgttgatgagctcgggcgtgaaagccccggcgatatcctcatttttatgagcggcgag
cgcgaaattcgcgataccgccgatgcgctcaataagctgaatctgcgccataccgaagtg
ctgccgctgtatgcgcgactgtccaacagcgaacagaatcgcgtgttccaggcccacagc
gggcggcggatcgtgctggccaccaacgtcgcggaaacctcgctgaccgtgccgggcatc
aagtacgttatcgatccaggtaccgcgcgtatcagccgctacagcttccggactaaagta
cagcgcctgccgattgagccggtttcccaggcgtcggctaaccagcgtaagggccgctgc
ggccgcgtctcagaagggatctgtattcgtctttattctgaagacgacttcctgtcgcgt
ccggagtttaccgacccggagattctgcgcaccaacctggcgtcggttattctgcaaatg
accgcgctcgggctcggcgatattgccgcgttcccgttcgttgaagcgccggacaaacgc
aatattcaggacggcgtgcgcctgctggaagagctgggagcgattactactgacgaacag
cagaccgcctataagctgacgccgatgggccgccagctgagccagctaccggtggacccg
cgtctggcgcgcatggtactggaagcgcaaaaacacggctgcgtgcgcgaggcgatgatt
atcacctcggcgctctctattcaggatccgcgcgagcggccaatggacaagcagcaggcg
tccgacgagaaacaccgccgcttccacgacaaagagtccgactacctggcgttcgtcaac
ctgtggaactacctgggcgagcagcaaaaagcgctctcctcgaaccagttccgccgccag
tgccgggtcgattttctcaactacctgcgcgtgcgcgagtggcaggatatctacacccag
ctgcgtcaggtggtcaaagagctcggcctgccggtcaatagcgagccggcggagtatcgc
gaaattcacaccgcgctgctgaccggtctgctgtcgcacatcggtatgaaagacgccgac
aagcaggagtttaccggcgcgcgcaacgctcgcttctccatcttccccggatcggggctg
tttaaaaagccgccgaaatggacgatggtcgccgaactggtggaaaccagccgcctgtgg
gggcgcatcgccgcgcgcattgagccggagtgggtcgagccggtggcgcagcatctgatc
aaacgctcgtacagcgaaccccactgggagcgcgggcagggcgcggtgatggcgacggag
aaggtgaccgtttacggcctgccgattgtcgctgcccgcaaggtcaactacagccagatt
gacccggcgctgtgccgcgaactgtttatccgccacgtgctggtggagggcgactggcag
actcgccacgctttcttccgcgaaaacctgaagctgcgcaacgaaattgaagagctggag
cataaatcgcgccgtcgcgacattctcgtcgatgacgaaacgctgtttgagttctacgac
cagcgcatcagccatgacgtcatctccgcgcgccactttgataaatggtggaagcaggcc
agccgcgagacgccggatctgctcaactttgaaaaaagcatgctgattaaggaaggcgcg
gagcaggtcagcaagctcgactatccgaacttctggcatcagggcaacctcaagctgcgt
ctgacctatcagttcgagccgggcgccgacgccgacggcgtgacggtgcacatcccgctg
ccgctgctcaaccaggtggaagaggccgggtttgagtggcagatcccggggctgcgccgg
gagctggttatcgccctgattaaatcgctgccgaagccggtgcgccgcaattttgtcccg
gcgccaaactacgcggacgcgtttctcggccgcgcgacgccgctggagctgccgctgctg
gattcactggagcgcgagctgcggcggatgaccggcgtgactatcgaccgcgaggcctgg
caatgggatcaggtgcccgatcacctgaaaatcactttccgggtggtggacgagaaaaac
aagaagctgcaggaagggcgttcgctgcaggatctgaaagatgcgctgaaaggtaaggtg
caggagacgctgtccgcggtcgccgatgacggtatcgagcagagcgggctgcatatctgg
agctttggccagcttccggagagctacgagcagaagcgcggcaactacaaagttaaggcc
tggccggcgctggtggacgaacgcgacagcgtggccatcaagctgtttgataatccgctg
gagcagcagcaggagatgtggcgcggcctgcgccgcctgctgctgctgaatatcccgtcg
ccgataaagtatctgcacgaaaagctgccgaataaagccaagctggggctctatttcaac
ccctacggtaaagtgctggatctgatcgatgactgcatcgcctgcggcgtggataagctg
attgacgaagcgggcggcccggtatggagcgaagagggctttgccgcgctgcatgaaaag
gtgcgcgccgagctcaacgagacggtggtggagatcgccaaacaggttgagcagatcctg
accgcggtgttcaacatcaataaacgcctgaaaggtcgcgtcgatatgaccatggcgctg
gggctgtcggatatcaaatcgcagatgagcgggctggtgtatcgcggtttcgtcaccggt
aacggcttccgccgccttggagacacgctgcgctatctgcaggcgattgaaaaacggctg
gagaaaatggccatcgatccgcaccgcgaccgcgcgcagatgcttaaagtggagagcatc
cagcaggcgtggcagcagtggctgaataagctgccgcctcagcgccgtcaggatgacgac
gtgcaggagatccgctggatgattgaagagctgcgcgtcagcctgttcgcccagcagctc
ggcacgccgtatccgatttccgacaagcgggtactgcaggcaatggagcagattacggcc
tag
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