Candidatus Kinetoplastidibacterium stringomonadis: CONE_0047
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Entry
CONE_0047 CDS
T02471
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kon
Candidatus Kinetoplastidibacterium stringomonadis
Brite
KEGG Orthology (KO) [BR:
kon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kon03016
]
CONE_0047
Enzymes [BR:
kon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CONE_0047
Transfer RNA biogenesis [BR:
kon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CONE_0047
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_P-MRP_p29
IBN_N
Motif
Other DBs
NCBI-ProteinID:
AGF48598
UniProt:
M1L7N4
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All DBs
Position
683870..685744
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AA seq
624 aa
AA seq
DB search
MYVFYDEGNTFRTGSIISETDNNLQIISEYGKHIKIKQSNCLFKFDIPEPHTLMKEAKKI
SKEIDTKFLWECSPDNNFKAIDLATEYFGHNPTNIEYVSILILLHNSPIYFYKKGTGQYV
SATFSAISSALINIEKKRLIEQEQEYIKNQLITGILPKVIRENAELLITNPDKKSIYWKA
LNAACTELKKSPEELLLSLKTWPNTLTLFKKRFVSINFPNGLNFPEFDSIKIIKNLDLSD
NEIYSLDDKNTTEIDDGLSVKELSDGAMEVGIYIAAPGLGIEPGSAYDISARFRASTIYM
PSEKIQMQPDEIIEKFSLDKGKEVPALSLYVTFDKNCIITESRSRIELVKVKDNLRINHL
EEEYTESNLEDLEKDITCSHWIRPLWKIAQKLNYARQINRGFPENNSYIDFSFYLDGNTN
DPNTIVHIEKRKRDCPINLVVSEFMILANNLWGGLMKKYNVPGIYRSQQPMSRVRVGTIP
LPHSGIGVPQYIWSTSPLRRYIDLVNQWQLISIIENEIAAPLFSPFRSGCNDLIGIIQEF
DIRYSAISNFQNEIENYWSIKWLTQNGIKKTTAYVIKDNLIKLIEVPLLVNIIDMPKIPK
GSVVEVEIIGIDELNCKLTCNYIQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttttctatgatgaaggtaacaccttcagaacaggtagtataatctctgaaact
gataataaccttcagataatttcagaatatggcaaacacataaaaataaaacaatctaat
tgtttatttaaatttgacattcctgagccacatacactaatgaaagaagctaaaaaaata
tcaaaagaaatagatacaaaatttctatgggaatgctcacctgataacaattttaaggct
atagacttagcaacagaatattttggacataatccgacaaatatagaatatgttagtata
ttgattttattacataattcacctatatatttctataaaaaaggtactggacaatatgta
tcagctacgttttctgcgatatcatcagccttaataaatatagaaaagaaaagattaata
gaacaagaacaagaatatataaaaaaccaacttataactggtattctgcctaaagttatc
cgtgaaaatgcagaattattaataacaaatccagacaaaaaatctatttattggaaagca
ttaaacgcagcatgtacagaattaaaaaaatcaccagaagaattacttttatctttaaaa
acttggcctaacaccttaaccttatttaagaaaagatttgtttcaataaactttccaaat
ggtttaaattttcctgaattcgatagtatcaaaataattaaaaatttagatttgtctgac
aatgaaatctactcattagatgataaaaatactacagagatagatgatggtttatccgta
aaagagctatcagatggggcaatggaggtaggaatatatatagcagctccaggattgggc
atagagcctggtagtgcatatgatattagtgcaagatttagagcttctactatatacatg
ccaagcgagaaaatacagatgcaaccagatgagataatagaaaaattttctcttgataaa
ggtaaagaagtccccgctttgtctttatatgtaacttttgataaaaattgcattattact
gaatctcgctctcgcatagagctcgtaaaagtaaaagataatctgcgaattaaccattta
gaagaagaatatacagaatccaatctagaggatcttgagaaagacataacatgctcacac
tggataagaccattatggaaaattgcacaaaaactaaattatgcaagacaaatcaacaga
ggatttccagaaaataattcttatatagatttctctttttatctcgatggcaacactaat
gaccctaatacaatagtacatatagagaaaagaaaaagagactgccctataaatttagta
gtatcagaatttatgatccttgcaaacaatttatggggaggattgatgaaaaaatataat
gtgcctggaatatatagatctcaacaaccgatgagcagagtgagggttgggactatacca
ttacctcattctgggataggtgtcccgcagtatatatggagcacttctccactaaggaga
tatattgatcttgttaatcaatggcaattaatttctataattgaaaatgaaatagcagca
cctttattctctccattcagaagtggatgcaatgatcttataggtataatacaagaattt
gatattagatactcagccatatcaaattttcaaaatgaaatagagaattactggtctata
aaatggctgacacaaaatggaatcaagaaaactactgcatatgtaattaaagataacctg
ataaaattaattgaagtccctctgttagtcaatataattgatatgcctaaaattccaaaa
ggctcagtcgtagaagtagaaataataggtattgatgagttgaattgcaagttaacttgc
aattacatacagtga
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