Candidatus Kinetoplastidibacterium stringomonadis: CONE_0105
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Entry
CONE_0105 CDS
T02471
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kon
Candidatus Kinetoplastidibacterium stringomonadis
Pathway
kon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CONE_0105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kon03400
]
CONE_0105
Enzymes [BR:
kon01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CONE_0105
DNA repair and recombination proteins [BR:
kon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CONE_0105
Prokaryotic type
CONE_0105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AGF48645
UniProt:
M1M9L8
LinkDB
All DBs
Position
733971..734684
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AA seq
237 aa
AA seq
DB search
MKLLSKNLIGFIERLPDVWHEIMFSYDNIRTLLCINKFIEARLLDGATIYPFNPTKALHR
ISSISDIKIIILGQDPYHGNGQANGFAFSVLENCQKLPPSLRNICKELSIEYPSREFVKL
SNLDCWANQGVLLLNSILTVEEGQPLSHKKIGWEIITDSIIKLISDDDSPKVFMLWGNYA
QSKDVLISSTKNNHLILKANHPSPLSACKKPLPFIGCNHFKIANEWLINHRKKPIIW
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattactatcaaaaaacttaataggttttatagaaagattgcctgatgtctggcat
gaaataatgttttcttacgacaatattagaacattgctatgtataaataaatttatagaa
gcaagactgttagatggagctactatatatccattcaaccccacaaaagccttacataga
atatcatcaatctctgatattaaaatcattatattagggcaagatccttaccatggtaat
ggacaagctaatggttttgcattctcggtattagaaaattgccagaagcttcctccaagc
ttaagaaatatatgtaaagaactatccattgaatacccatctagggaatttgtgaaatta
agtaatctggattgctgggctaatcaaggagtactgcttctcaattctattttaacagtt
gaagaaggacaaccactatctcataaaaaaataggttgggaaattataactgattctatt
ataaaactaatatctgatgatgattcgccaaaggtttttatgttgtggggtaactatgca
caatcgaaagatgtgttaattagttcgactaaaaataatcatttgatacttaaagctaat
catccttcaccactatcagcttgtaaaaaaccattacctttcataggatgcaatcacttc
aaaatagcaaatgagtggctgattaatcacagaaaaaaacctattatttggtaa
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