Candidatus Kinetoplastidibacterium stringomonadis: CONE_0440
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Entry
CONE_0440 CDS
T02471
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
kon
Candidatus Kinetoplastidibacterium stringomonadis
Brite
KEGG Orthology (KO) [BR:
kon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kon03016
]
CONE_0440
Enzymes [BR:
kon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CONE_0440
Transfer RNA biogenesis [BR:
kon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CONE_0440
Prokaryotic type
CONE_0440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
CATSPERE_NTD1
Motif
Other DBs
NCBI-ProteinID:
AGF48229
UniProt:
M1LYM1
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All DBs
Position
248458..249252
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AA seq
264 aa
AA seq
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MYRIAMGISYNGSGFCGWQTQSNSCSIQDIIENALYNFSGSKKTRVVCAGRTDAGVHAVN
QVIHFDTNLNREIESWIRGVNSFLPKSISVTWAQLVDKNFHARFSAISRTYSYIIYCSKV
RSAIYNELVGWNFYILDIELMKSAVNLLVGKHDFSSFRSSQCQSKTPIRTIYSANIQKHG
PFIIFTIIANAFLHHMIRNIVGSLICIGRSNKDPIWIKELLLAKDRTKGGATFSPNGLYL
MDVEYPSNFCINKKKFDNQFFLHF
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaattgctatgggcatttcttacaatggttctggtttctgtggatggcaaact
caatctaattcttgctcaatacaagatattatagaaaatgctttgtataatttctctgga
tccaagaaaactagagtagtttgtgctgggcgtactgatgcaggagtgcatgctgttaat
caggtaatacattttgatacaaatctaaacagagaaattgaatcttggatcagaggagtc
aattcttttttacctaagtctatttctgtaacatgggctcaattggtagataaaaatttt
catgcccgttttagcgcaatatctagaacttattcttatattatatattgttcaaaagta
cgttctgccatttataatgaattagttggatggaatttttatattttagatattgaattg
atgaaaagtgctgttaatttattggtaggaaaacatgactttagcagttttagatcatca
caatgtcaatcaaaaactcctattaggactatttatagtgctaatatccaaaaacatgga
ccattcataatttttactataattgccaatgcttttcttcaccatatgattcgtaatata
gttggttcattaatttgtattgggcggagtaataaagatcctatttggattaaagaatta
ttgttagctaaagatagaacaaaagggggggctaccttctctcctaatggcttatattta
atggatgttgaatacccatctaatttttgcataaataaaaaaaaatttgataatcaattt
tttttgcatttttaa
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