Candidatus Kinetoplastidibacterium stringomonadis: CONE_0453
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Entry
CONE_0453 CDS
T02471
Name
(GenBank) DNA helicase II/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kon
Candidatus Kinetoplastidibacterium stringomonadis
Pathway
kon03420
Nucleotide excision repair
kon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CONE_0453
03430 Mismatch repair
CONE_0453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kon03400
]
CONE_0453
Enzymes [BR:
kon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CONE_0453
DNA repair and recombination proteins [BR:
kon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CONE_0453
MMR (mismatch excision repair)
Other MMR factors
CONE_0453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGF48241
UniProt:
M1LW10
LinkDB
All DBs
Position
261648..263900
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AA seq
750 aa
AA seq
DB search
MILEELNKAQKAAVTLESSHALVLAGAGSGKTKVLASRLAWLLDTNQVDISNVLAVTFTN
KAAKEMISRVLRMVNIDTRRLWIGTFHSLCHRMLRIHCDDINLSRNFQIIDASDQLSLIK
QLIKSNNINDLKYQPKDFQRFINSHKENGIRFISVNIQRNCNRNLLDFYKLYEDYCFKHD
LVDFSELLLRCYELLKNNENLRARYNDKFSHILIDEFQDTNNLQYSWIDLLIGRKTFVFA
VGDDDQSIYAFRGANVDNMSSFEKTYAKGSIIRLEQNYRSFGHILGAANSLIKHNKGRLG
KTLWTDQGDGELIRVVENSNDVGEAHWIVEEIRNLIRNGTDAHKIAILYRSNMQSRVIEH
ALFSSNISYIVYGGLRFFERQEVKHALAYLRLIANPNDDNAWLRVVNFPSRGIGARTIEN
HLELAKSNNLSLRDSAKQVSGRGGISILSFSNLIDDLILNSTKLTLPELINYTIERSGLV
SYYKSEKDLYERLENLKELITAATVFSIEEKCISIPASCSFSVNKHTEDEIISTPLLSFL
SNSSLEANESLSGDHASSVQLMTVHASKGLEFKVVFITGAEEGLFPHENSILEDSGLEEE
RRLMYVAITRAEEKLYISMANSRMLRGQVRYSLSSRFLNEIDANHIQRYKFENIYKNNSS
RLFKEKLNIDYNKPSKNNLAHTSGSTSSNKSSIVNDKLFLVGQSVNHNRFGDGIIVKLIG
EGSSAQAQVNFQKYGMKTLALTIAKLEIKN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgattctagaagaacttaataaagcgcagaaagcagcagtaactcttgaatcttcacat
gcattggttttagctggagcaggcagtggcaaaaccaaagtgttagcatcaagattagct
tggctattagatactaatcaagttgatatatctaacgttttagctgtaacatttaccaat
aaagctgcaaaagaaatgatttctcgtgttttgagaatggtgaatatcgacacacgtagg
ctttggataggaacttttcatagtttatgccatagaatgttgaggattcattgcgatgat
ataaacctatctagaaattttcaaattatagatgcctcagaccaattgtcactgataaaa
cagctaattaaaagtaataatatcaatgatttaaagtatcagccaaaagattttcaacgt
tttataaattctcataaagaaaatgggattaggtttattagtgttaatatccaaagaaat
tgtaatcgtaatttgttggatttttataaattgtatgaagattattgttttaagcatgac
ttagtggacttctctgaattgctgctaagatgctacgaacttttaaaaaacaatgaaaat
ctacgagcacgatataacgacaaattttctcatatactaatagatgaatttcaagacact
aacaatttgcaatatagttggatagatttgcttattggaagaaaaaccttcgttttcgca
gtcggtgatgatgatcagtctatctatgcatttcgtggtgcaaatgtagataacatgtca
tcatttgaaaagacttatgctaagggatccattattcgtttagagcaaaactatagatct
ttcggacatattctaggagcagcaaattctttaataaaacataataaaggacgtcttggc
aaaactttatggacagaccaaggagatggagagcttattagggttgttgaaaattctaat
gatgtaggtgaggctcattggatagttgaggaaataagaaatctaataagaaatggcaca
gatgctcataaaattgctattttgtatagaagcaatatgcaatctagggttattgagcat
gctttattttctagtaatatatcatatatagtttacggtggtcttagattttttgagcgt
caagaagttaaacatgctttagcctatttaagactcatagcaaatccaaatgacgataat
gcttggttgagagttgtaaatttcccatcacgtggcattggtgcacgtactatagaaaac
catttagaattagcaaaatcaaataacttaagcttgagagattctgcaaaacaagtttct
ggtagaggaggaataagcatattatccttttcaaatctaattgatgatcttattcttaac
tctactaaacttactttgccagaattaataaattacactatagaacgtagcggcctggtt
tcatactacaaaagcgaaaaagatttgtatgaacgcttagaaaatttgaaagagctcata
acagctgctactgtattttctatagaagaaaaatgtattagtatccctgcatcatgttca
ttctctgtgaataaacatacagaagatgagattatttctactccactattatcctttctt
tcaaattcatctctagaagctaatgaaagcttatctggtgatcatgcatcttcagtacaa
ctaatgacagttcatgcttctaaaggtttagagtttaaggttgtctttattacaggagcg
gaggaaggattattccctcatgagaacagcatattagaagattctggattagaggaagaa
cgtaggttaatgtatgttgcaataactagagcagaagaaaagttatatatttctatggcg
aacagtcgcatgttgagggggcaggttcgttattctttaagttctcgttttttaaatgag
atagatgctaatcatattcaacggtataaatttgaaaacatttataagaataactctagt
agattatttaaagaaaaattaaatattgattacaataaaccaagcaaaaataatctagct
catacttctggttcgacttcttctaataaaagttcaatcgtaaatgataaattattcttg
gttggtcaatctgtaaatcataaccgttttggtgatggtattatagtaaaattgataggg
gaaggaagttcagcacaagcacaagttaattttcaaaaatatggtatgaagactttagct
ttaactatagccaagttagaaattaaaaattag
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