Candidatus Kinetoplastidibacterium stringomonadis: CONE_0467
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Entry
CONE_0467 CDS
T02471
Name
(GenBank) excinuclease ABC subunit B uvrB
KO
K03702
excinuclease ABC subunit B
Organism
kon
Candidatus Kinetoplastidibacterium stringomonadis
Pathway
kon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CONE_0467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kon03400
]
CONE_0467
DNA repair and recombination proteins [BR:
kon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CONE_0467
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CONE_0467
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AGF48252
UniProt:
M1LRW1
LinkDB
All DBs
Position
276201..278216
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AA seq
671 aa
AA seq
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MTNNRFVAFSSNSPFNLFQPYKPAGDQPEAIDKLMNGLEDGLRYQTLLGVTGSGKTYTMA
NVIARTGRPSLILAPNKTLAAQLYSEMRDFFPKNAVEYFVSYYDFYQPEAYIASKDIFIE
KDSRINAHIEQMRLSATKSLVERRDTIIVSTVSCIYGIGDMTCYNSMAFSLRLGNLVSRD
EFLKNLIDMQYVRDDEEFSRSKFRVRGEYIDIFPAESFDLALRVYLVDDKIEKLSLFDPV
IGKIFQDVSRFALYPVSHYAVPRETILSAIDTIKDELRQQLNFLIKNNKILEAKRLEQRT
GFDLEMLQETGFCKGIENYTRHISKSLPGAPPSTLMSYLPSDAIIFIDESHITLGQLSGM
YYGDRSRKETLARHGFRLPSALDNRPLKFEEFENMVKQCIFVSATPSNYEKEHSSNVVEQ
LVRPTGLVDPVVEVRPAKTQIDDLLYQIKKRIVLKERIFVTTLTKRMSENLTDFLKENGI
KVRYLHSDIDTVERAEILRDLRIGSFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRS
ERSLIQTIGRAARNLNGHSILYADKMTESMRKAIDETQRRRERQLEFNSLHGIKATGIKK
DIRELIDGVVVNNKSLPVNFDKKIVKSHKKLSKEIKRLEKSMVDHANKLEFEKAAEARDS
LNALKELLLFS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgacaaataatagatttgtagctttttctagcaacagtccattcaatctttttcagcct
tataagccagcaggtgatcagccagaggcaattgataaattaatgaatggtttagaagat
ggtttacgttatcagactttattaggggttactggctctggtaaaacttatactatggca
aatgtgatagcaagaactggcagaccatctttgatattggctccaaataaaacattagct
gcacaattatattcagaaatgagggacttttttcctaaaaatgcagttgagtattttgtt
tcttattatgatttttatcaaccagaggcttatatagcatcaaaagatatctttattgaa
aaagattctcgcattaatgctcacatagagcaaatgcgtttatcagcaactaaaagtcta
gtagaaaggcgtgataccattatagtcagcactgtatcttgtatatatggtattggtgac
atgacttgttataattctatggccttttcgttacgtttaggtaatttagtatctagagat
gaatttttaaaaaatttgatagatatgcagtatgttagggatgatgaagaattttctaga
tctaaatttcgtgttcgtggcgaatatatagatattttcccagctgagagctttgattta
gcgttgagagtttatttggttgatgacaagatagagaaattatctctatttgatccagtc
attggtaaaatatttcaagatgtttctcgctttgctttataccctgtttctcactatgct
gttcccagagaaacaatactatcagctattgatactataaaagatgaactaagacagcag
ttaaattttttaataaagaataataaaattctagaagcaaaacgcttagaacagagaaca
ggatttgatttagaaatgttacaagaaacaggtttttgcaaaggtattgaaaattatact
agacatatttctaaatccttgccaggagctcctccaagtactttgatgagctatttacca
tcagatgccattatatttatcgatgagagtcatataaccctcggtcaattatcaggtatg
tattatggagacagatccagaaaagaaactttagcaagacatggttttcgtttaccttca
gcactggataatagaccattaaagttcgaagaatttgaaaatatggttaagcaatgcatt
ttcgtctcagcaactccttctaattacgaaaaagaacattctagcaatgtggttgagcaa
ttagttagaccaactggattagttgatccagttgttgaggttaggccagcaaaaacacag
attgatgatcttttatatcagataaaaaaaagaattgtattaaaagagagaatatttgtt
acaacattaacaaaacgaatgtctgaaaatttaaccgattttttgaaggaaaatggcata
aaagtaagatatttacactcagatatagatactgttgaaagagctgagatattaagagat
ttgcgtatcgggtcttttgatgttttagtaggaataaatttactaagagaaggactagat
ataccagaggtatctttagtagctatccttgatgcagataaagaaggttttttaagatca
gaacgtagtttgattcagactataggtagagctgctaggaatttgaatggtcactcaata
ttatatgctgacaaaatgacagaatctatgcgaaaagctatagatgaaacgcaaaggaga
agagaaagacaattagaattcaattccctacatggaatcaaagcaactggtattaaaaaa
gatataagagagcttatagatggagttgttgttaataacaaatccttaccagttaatttc
gataaaaaaattgtaaaatctcataaaaaattatcgaaggaaattaaaagactggagaaa
tctatggtagaccacgctaataaattagaatttgaaaaagctgctgaggctcgtgattct
ctgaatgcattaaaagaacttcttttatttagttaa
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