Candidatus Kinetoplastidibacterium stringomonadis: CONE_0642
Help
Entry
CONE_0642 CDS
T02471
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kon
Candidatus Kinetoplastidibacterium stringomonadis
Pathway
kon03030
DNA replication
kon03410
Base excision repair
kon03420
Nucleotide excision repair
kon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CONE_0642
03410 Base excision repair
CONE_0642
03420 Nucleotide excision repair
CONE_0642
03440 Homologous recombination
CONE_0642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kon03032
]
CONE_0642
03400 DNA repair and recombination proteins [BR:
kon03400
]
CONE_0642
Enzymes [BR:
kon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CONE_0642
DNA replication proteins [BR:
kon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CONE_0642
DNA repair and recombination proteins [BR:
kon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CONE_0642
NER (nucleotide excision repair)
GGR (global genome repair) factors
CONE_0642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AGF48397
UniProt:
M1LS73
LinkDB
All DBs
Position
complement(436443..439148)
Genome browser
AA seq
901 aa
AA seq
DB search
MPEKLLLLDGSSYLYRAFYAMPDLRNSSGEPTGAIYGVINMVRKLLFDYNTNYIACVFDS
SEKTFRKEIFPSYKANRAHMPEDLIKQTKYIYKIIEALGLPIYYSNNFEADDIIGSIAAK
ISKISDLDIVISSGDKDLSQLVNNRVSIVNTMNNEVLDEKGVTKKFGVPPHLIIDYLMLI
GDSVDNIPGVKNIGPKTAVKLLNKYGSLDNIILNIKEITGLIGINLRDFIDRFELTRKLL
TIKCDCDLITSINSKEDFLIKPVNNNVLIDLYTKFEFSLWLNDINKEYTDNLSINLEKSS
MDDSLSNIEIVDSICSLDLFLSCLNNSEIVAVDFVFTSTRPMLSKLVSISCLSNRKLFYI
PVVSQKSDKYLQKKYILSLLRPWLEDVTKQKIVHNAKNCFHVLYNEGIELRGVKDDIMLQ
AYVLNSHNNTSIDKLSEKFLKIKHNSYKEMYGKCTECDDFINFDIIYAANYSAKNSLIIM
ELYRIFSKLLSDEVDLNSIYKLEMEISTILSIIEINGVAIDSDKLQEHGFKLSEIISQLE
LKIYNIVGKKFNINSPKQLGEILFNLMKYPLVKKTSAGIPSTDESVLKKLSNDFLLPNIL
LEYRSLTKLKSTYTDKLPSMVNINTGRLHTNYSQIGVVTGRLSSSDPNLQNIPIRTDLGK
MIRQAFVSREGYLLMSADYSQIELRVMAHVSDDSNLKTAFSEGKDIHSVTASEIFNIDVS
NITQEQRRAAKAINFGLLYGMGIFGLSAALKISKNDAKQYIDQYFFRYPFVANYMENICK
KAKKYGFVETIFGRRIYIPEISNSSLHNRQSSERAAINAPIQGAAADIMKMAMISVQNWL
LKNNMMTRIVMQVHDELIFEANETEVSELKDVLPSLMCDIVNLSVPLVIEIGIGKNWSQA
H
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaagttattgctattagatggttccagttatttatatcgtgctttctatgct
atgcctgatttgcgcaattcatcaggagagcctacaggagccatatacggcgtcattaat
atggttcgcaaactactttttgactataatacaaattacattgcctgtgtttttgattct
tcagaaaaaacctttaggaaagagatattcccttcctataaggcaaatcgtgcgcatatg
cctgaagatttaattaaacagacaaaatatatttataagataatagaggctttaggacta
cctatttactattccaataattttgaagcggatgatattattggatctatagctgcaaaa
atttcaaaaatatctgatcttgatatcgtaatatcatctggtgataaagatctgtctcag
ttagtgaataatcgtgtatcaatagttaatactatgaataatgaggtattagatgaaaaa
ggagtaacaaagaaatttggtgtgcctcctcatctaattattgattatctgatgttaatt
ggtgattctgtagataatataccaggtgttaaaaatattggacctaagactgctgtaaaa
cttttaaataaatatggatctctagataatattatattaaatatcaaagaaataactgga
ttaataggtataaatttacgtgattttatagatagatttgaattaacaagaaagttatta
acaataaaatgtgactgtgacttgattacaagcataaattcaaaagaagattttttaata
aaaccagtaaataataacgtattaattgacctttatacaaaatttgagtttagtttatgg
ttgaatgatataaataaagaatatactgataatcttagtattaatttagaaaaatcatct
atggatgattcattaagtaatattgaaatagttgatagcatatgtagtttagatttgttt
ttaagttgtttaaataattcggaaatagttgcggttgattttgtttttacttcaacaaga
cctatgttatcgaaattagtttctatttcttgtttatcaaatagaaagttattttatatt
ccagtcgtaagtcaaaaatcagataaatatttacaaaaaaaatatatattgtctttgctt
aggccatggctagaagatgttaccaagcagaaaatagtacataatgctaaaaattgtttc
cacgttttatataatgaaggaattgagctaagaggagtaaaggacgatattatgctacaa
gcatatgtcctaaattcacataacaatacatctatagataagctttcggaaaaattcctt
aaaataaaacataattcatacaaagagatgtatgggaaatgtacggaatgtgacgatttt
attaattttgatatcatttatgctgctaattattctgctaaaaattccttaatcataatg
gaattatatagaatattttctaaattactttcagacgaagttgatttaaattcaatttat
aaattagaaatggaaatatcaactattcttagtattattgaaataaatggagtagctata
gattcagacaagctacaagaacatggttttaaattatctgaaataatttcacaattagaa
ttaaagatttacaatatagtaggtaaaaaattcaatataaattctccaaagcagctaggt
gagattttatttaatttaatgaaataccctcttgtcaagaaaacatcggcaggaatacca
tccactgatgagtctgtattaaaaaagttatctaatgattttctcttaccaaatatactt
ctagagtatagatctctaactaaattaaaatctacttatactgataaattacctagtatg
gttaatatcaatacaggaagattacatactaattattcacaaataggtgtggtaacaggc
agattatcatcttcagatcctaacttgcaaaatataccaattcgtacagatttaggtaaa
atgataagacaagctttcgtttctagagagggatacttattaatgtcagctgattattca
caaatagagttaagagtcatggctcatgtttccgatgattctaacttgaaaactgctttt
tcagaagggaaagatatacattcagttacagcttcagaaatatttaacatagatgtaagt
aatattactcaagagcaacgaagggcagctaaagcaataaattttggcttactttatggt
atgggtatttttggtttgtcagcagctttaaaaattagtaagaatgatgcaaagcagtat
attgatcaatattttttccgttacccttttgtagcaaattatatggaaaatatatgcaag
aaggctaaaaaatacggatttgttgaaacaatattcggtcgtagaatatatattccagaa
atatctaactcttctttacataatcgtcaatcatcagaacgagcggctataaacgctcct
attcaaggtgcagcagctgatattatgaaaatggctatgatatctgttcagaattggtta
ttaaaaaataatatgatgactaggattgtaatgcaggttcatgatgaattaatatttgaa
gctaatgaaacagaagtttctgagctaaaagatgttttaccttctttgatgtgtgatata
gttaaccttagcgtacctttagtaatagaaattggtattggcaaaaactggtctcaggct
cattaa
DBGET
integrated database retrieval system
