Kosakonia oryzendophytica: O9K67_01725
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Entry
O9K67_01725 CDS
T08786
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
koo03021
]
O9K67_01725 (rpoH)
Transcription machinery [BR:
koo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O9K67_01725 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
SANT_DAMP1_like
UCR_14kD
HTH_10
HTH_3
DUF6930
HTH_25
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
WBT58543
LinkDB
All DBs
Position
373792..374649
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AA seq
285 aa
AA seq
DB search
MTKEMQTLALAPVGNLESYIRAANAWPMLTADEERALAEKLHYQGDLEAAKKLILSHLRF
VVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDMSPDDDAQDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANKLVDAMQGLDERSQQI
IRARWLDEENKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctttagcccctgttggtaacctggagtcgtatatc
cgggccgctaacgcatggccgatgttgacggctgatgaagagcgggcactggctgaaaag
ctgcattaccagggcgatctggaagcagcgaaaaagctgattctgtctcacctgcgcttt
gttgttcatattgctcgtaattactcgggctatggtctgccgcaggcggatctgatccag
gaaggtaatatcggcctgatgaaagccgtgcgtcgtttcaacccggaagtgggcgtgcgc
ctggtctccttcgccgtacactggattaaagctgagatccacgagtacgtattgcgcaac
tggcgtatcgtgaaggtcgccaccacaaaagcacagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggttggttcaatcaggatgaagtggaaatggttgcccgtgag
ctgggcgtaaccagcaaagacgtgcgtgaaatggaatcgcgtatggccgcccaggacatg
acctttgatatgtcgcctgatgacgatgcgcaagacagccagccaatggcaccggtgctt
tatctgcaggataaatcgtctaactttgccgacggcattgaagacgataactgggaagag
caggccgctaacaaactggtcgatgcgatgcaggggctggacgaacgtagccagcagatt
attcgcgcccgctggctggacgaagagaataagtccacgttgcaggagctggccgaccgt
tacggcgtgtctgccgagcgtgtgcgtcagttagaaaagaacgcgatgaaaaaactgcgc
gccgctatcgaagcgtaa
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