Kosakonia oryzendophytica: O9K67_03005
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Entry
O9K67_03005 CDS
T08786
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
koo03016
]
O9K67_03005 (truB)
Enzymes [BR:
koo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
O9K67_03005 (truB)
Transfer RNA biogenesis [BR:
koo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
O9K67_03005 (truB)
Prokaryotic type
O9K67_03005 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WBT58784
LinkDB
All DBs
Position
618923..619870
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AA seq
315 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKQQGASSNDVLQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPLTFTAEQLAAALESFRGDTQ
QIPSMYSALKYQGKKLYEYARQGIDVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIVDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEQLRELVEQAEQQAIPAAQLLDPL
LMPMDSPASDFPVVNIPSVVAAYFKNGQPVRTSAAPKEGLVRVTEGDEAKFIGMGEIDDE
GRIAPRRLVVEYPAV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgatgtgcatggcgtgttgctgctggataaacag
caaggcgcgtccagcaatgatgtcttgcaaaaagtgaagcgcctctataatgccaaccgc
gccgggcatactggcgcgctggatccgctggccaccggcatgctgccgatttgtctgggt
gaagcgacgaaattctctcaatatttgctggattctgataaacgctatcgggtgattgct
cgccttggtcagcgtacggatacctcggatgctgatgggcagattgttgaagaacgcccg
ctgacgttcaccgcagagcaactggcggcggcgttggaaagtttccgcggtgatacgcaa
cagatcccgtcgatgtattctgcgttgaagtatcaaggaaagaagctctacgaatatgcg
cgccaggggattgacgtcccgcgtgaggcccggccaatcacggtttatgagctgctgttt
atacgccatgaaggtaatgaacttgagttggaaattcattgctcgaaggggacgtatatc
cgcacgatcgttgatgatcttggcgagaaactcggttgcggcgcacacgttatttacctg
cgtcgtctggcggtgagtaagtaccccgtcgagcgaatggtcacgcttgaacagttacgt
gaactggtggagcaggctgagcagcaggctattccggcggcgcaattattggatcccttg
ctcatgccgatggacagccctgcgtctgatttcccggttgttaatattccgtccgttgtg
gctgcgtactttaaaaacggtcagccggtgcgtacatcggccgcaccaaaagaggggctg
gtacgcgtgacagaaggtgacgaagcgaaattcatcggcatgggtgaaattgacgatgaa
ggccgcattgcaccgcgtcgtctggttgtggagtatcctgccgtataa
DBGET
integrated database retrieval system
