Kosakonia oryzendophytica: O9K67_03015
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Entry
O9K67_03015 CDS
T08786
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O9K67_03015 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
koo03019
]
O9K67_03015 (pnp)
03016 Transfer RNA biogenesis [BR:
koo03016
]
O9K67_03015 (pnp)
Enzymes [BR:
koo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
O9K67_03015 (pnp)
Messenger RNA biogenesis [BR:
koo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
O9K67_03015 (pnp)
Transfer RNA biogenesis [BR:
koo03016
]
Prokaryotic type
tRNA degradation factors
O9K67_03015 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
S1_RRP5
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
WBT58786
LinkDB
All DBs
Position
620533..622668
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVSMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKASKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQVVIQNINELVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKKVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQIIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDAEK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQTQPAEAAEAPQAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtatggccaacacaccgtcacgctggaaact
ggcatgatggcccgtcaggccaccgctgccgtaatggtaagcatggatgacaccgccgta
ttcgttactgttgttggtcagaaaaaagctaaaccaggtcaggactttttcccactgacc
gttaactatcaggagcgtacttacgctgcaggtaaaatccctggtggtttcttccgtcgt
gaaggccgtccgagcgaaggcgaaaccctgattgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggtttcgttaacgaagttcaggttattgctactgttgtttccgtt
aacccgcaggttaacccggacatcgtatcgatgatcggtgcttctgctgcgctgtctctg
tctggtatcccgtttaacggcccaatcggtgcggctcgcgttggttatatcaacgaccag
tacgtgctgaacccgactcaggaagagttgaaagcaagtaagctggatctggtcgttgcc
ggtactgaagccgcggttctgatggttgaatccgaagcagaactgctgagcgaagaccag
atgctgggcgcagtggtatttggccacgaccagcagcaggttgttatccagaacatcaac
gagctggtgaaagaagctggcaaaccgcgctgggattggcagccggaagcagtaaacgaa
gcgttaaatgcgcgtgttgctgcgctggcggaatctcgtctgagcgatgcttaccgcatc
actgacaaacaagagcgttatgctcaggttgacgtgatcaagtctgaaactatcgcgacg
ctggttgctgaagacgaaacgctggatgctaacgagctgggtgaaatcctgcacgctatc
gagaaaaaggttgtgcgtagccgcgtactggctggcgaaccgcgtatcgatggtcgcgaa
aaagacatgatccgtggtctggacgttcgcactggcgtactgccgcgtactcacggttca
gcactgttcacccgtggtgaaacgcaggcgctagtgaccgcaacgctgggtaccgcacgt
gatgcacagatcatcgatgaactgatgggcgagcgtactgattccttcctgttccattac
aacttcccgccgtactccgtaggcgaaaccgggatggtgggttcgccgaaacgtcgtgaa
attggtcacggtcgtctggcgaaacgcggcgtactggcagtcatgccggatgcagaaaaa
ttcccgtacaccgtgcgcgtggtttctgaaatcaccgaatctaacggttcttcctccatg
gcatctgtgtgcggcgcatctctggcgctgatggacgctggcgtgccggtgaaagcggcc
gtagctggtatcgcaatgggtctggtgaaagaaggcgacaactttgtagttctgtctgat
atcctgggcgatgaagaccacctgggcgatatggacttcaaagttgcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgctgaatcaggcgaaaggcgcacgtttgcatattctgggcgtgatggagcaggcg
attaacgcgccacgcggcgatatttctgaattcgcaccgcgtatccataccatcaagatc
aatccggacaagatcaaagacgtgatcggtaaaggcggctccgtgatccgcgcgctgacc
gaagaaaccggcacaaccattgaaatcgaagatgacggtaccgtgaaaattgcggcaacc
gacggcgataaagcaaaacatgctatccgtcgtatcgaagagatcaccgctgagatcgaa
gtgggccgcatctataacggtaaagtgacccgtatcgttgactttggcgcgtttgttgcc
atcggcggcggtaaagaaggtctggtgcatatttctcagatcgctgacaagcgtgttgag
aaagtgaccgactatctgcagatgggccaggaagtgccggtgaaagttctggaagttgat
cgccagggccgtatccgtctgagcattaaagaagcaactgagcaaactcagcctgctgaa
gcggcagaagcgccgcaggcagagcagggcgagtaa
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