Kosakonia oryzendophytica: O9K67_04470
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Entry
O9K67_04470 CDS
T08786
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00040
Pentose and glucuronate interconversions
koo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
O9K67_04470
Enzymes [BR:
koo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
O9K67_04470
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
PolyG_pol
Motif
Other DBs
NCBI-ProteinID:
WBT59060
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Position
complement(925383..926558)
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AA seq
391 aa
AA seq
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MAKGMRVKLQYAVSRDPDTGAEITRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGNW
NYYLLDIANAEAVQLTEGAGDNTFGGFLSPDDSTLYYVKNDRTLREVNLQTLAEREIYRV
PDEWVGYGTWVANSDCTKLVGIEIAASDWTPLNSWQLFHDFFHKGPHCRLLRVDLQNGQS
SVIHEEKNWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSHVRKVKDHAEGESC
THEFWVPNGSALVYVSYLKGKQGRTIYRFNPDSGVNEAVMPMPACSHLMSNVDGTLLVGD
GSGTPVDVKDTSGYTIDNDPYLYVFDVAQKAYFRVARHDTSWATVANSRQVTHPHPSFTP
DDSAILYSSDKDGKPALYIAKLPAQRVMLQA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggcatgcgggtaaaactgcaatacgcagtcagccgcgatccggacaccggc
gcggaaatcacccgcttaaccccgccggaagtgacctgccaccggaactacttttatcag
aagtgtttttttaacgatggcagtcatctgttgtttgccggtgaatttgacggcaactgg
aactactacctgcttgatatcgctaatgcagaagccgtacaactgacggaaggcgctggc
gataacacctttggcggctttctctcacccgacgatagcacgctctattacgtgaagaat
gaccgtacgctgcgcgaagtgaatttgcagacgctggccgaacgtgagatctaccgcgta
ccggatgagtgggtaggttacggtacatgggttgccaacagcgactgcaccaaactggtg
gggattgagattgccgccagcgactggacgccgctgaacagctggcaattgttccacgat
ttcttccataaaggcccgcactgccgtctgttacgcgttgatctgcaaaacggccaaagc
agcgtcatccatgaagagaaaaactggcttggtcacccgatttaccgcccgttcgatgac
aataccgtggcgttttgtcatgaaggtcctcatgacctggtggacgcgcggatgtggctg
gtcaacgaagatggcagccatgtgcgtaaagtgaaagatcacgcggaaggcgaaagctgc
acgcatgaattctgggtgccgaacggctccgcgctggtgtatgtctcgtacctgaaaggc
aaacaagggcgcacgatttaccgctttaatccggatagtggtgtaaacgaagccgtgatg
ccgatgccggcctgctctcacctgatgagtaacgttgacggtacgctgctggttggcgac
ggttccggtacgccggtggatgtgaaagacaccagcggctacaccattgataacgatccc
tatttgtatgtgtttgacgtggcacaaaaggcctatttccgcgtggcccgtcatgacacc
tcatgggcgaccgtggcaaacagccgccaggtaacgcatccgcatccgtcgtttactccg
gatgacagcgccattttgtacagctctgataaagacggcaaaccggcgctctatatcgca
aaacttcccgcgcagcgcgtcatgctgcaggcataa
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