Kosakonia oryzendophytica: O9K67_04500
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Entry
O9K67_04500 CDS
T08786
Name
(GenBank) oligogalacturonate lyase family protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00040
Pentose and glucuronate interconversions
koo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
O9K67_04500
Enzymes [BR:
koo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
O9K67_04500
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Planc_extracel
Motif
Other DBs
NCBI-ProteinID:
WBT59066
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All DBs
Position
complement(932448..933578)
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AA seq
376 aa
AA seq
DB search
MAKGKIIPLTYRRQKDPHTGHEVIRMTPPHIICHRNYFYQKCFTRDGGKLIFGGAFEGHW
NYYLLDIARSEATQLTEGAGDNTFGGFLSADDRDLWYVKNTRELRRVDLSTLEEYVVYEV
DDDWVAYGTWVANSDCTKLVGIEIKKSDWQPLTDWQKFRDFYFTHPECRLICIDLQSGER
STLLQEKRWLGHPLYRPFDDKTVAFCHEGPRDAIDARMWLINEDGSNLRKVRQHEAGESF
THEFWVPDGSALYYVAHRENDARRYLFSADPQTLENRQLMAIPPCSHLMSNNDGSLVVGD
GAPHHTGDIHLNDPFIWVFDVQSGEQTAICQHNSSWKVLDGDRQVTHPHPSFSPDNQWVL
YTSDADGMPALYLAKV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtaaaatcatcccgctgacataccgtcgccagaaggatccgcataccggg
cacgaggttatccggatgacgcctccgcacattatttgtcaccgtaactacttctaccaa
aaatgctttacccgcgatggcgggaaactgatctttggcggcgcattcgaaggccactgg
aactattacctgctggatatcgcccgcagcgaggcaacccagctaaccgaaggggccggg
gataataccttcggcggttttttgtctgccgacgatcgcgacctgtggtatgtaaaaaat
acccgagaattacgccgcgtcgatctgagcacgctggaagagtatgtcgtttatgaggtg
gatgatgactgggtagcttacggcacctgggtcgccaattccgactgcaccaagctggtg
ggcatcgagattaaaaaaagtgactggcagccgttaacggactggcaaaaattccgcgat
ttctatttcacccatccggaatgccggctgatctgcattgatctgcaaagcggtgagcgc
agcacgttgttgcaagaaaaacgctggctggggcaccccctctaccgcccgtttgacgat
aaaaccgtggcgttttgccatgaaggtccgcgcgatgcgattgatgcgcgcatgtggttg
atcaacgaagatggtagcaacctgcgcaaggtgcgccagcatgaggctggtgaaagtttt
acccatgaattttgggtaccggatggctccgcgctctactacgtggcacaccgggaaaat
gacgcccggcgctatctgttcagcgccgatccacagacgctggaaaaccgccagctcatg
gcgatccctccctgttctcacttgatgagcaacaatgacggcagtctggtggtcggtgac
ggcgcgccccatcacaccggagatattcatcttaacgacccctttatttgggtgtttgat
gtgcaaagcggggaacaaacggctatctgccagcataacagtagctggaaagtactggac
ggcgaccgccaggtcacccacccgcacccgtcattctccccggataaccagtgggtactc
tatacctcagacgccgacggcatgcctgcgctctatttagccaaagtttga
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