Kosakonia oryzendophytica: O9K67_04650
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Entry
O9K67_04650 CDS
T08786
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O9K67_04650 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_04650 (recC)
Enzymes [BR:
koo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
O9K67_04650 (recC)
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O9K67_04650 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WBT59093
LinkDB
All DBs
Position
962491..965862
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AA seq
1123 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERDPLDDPFEPEVVLVQSTGMAQWLQMTLAQKFGIAANI
TFPLPASFIWDMFVSVLDDIPKESAFNKQSMSWKLMSLLPGMLQREEFAMLHHYLSDDDD
KRKLFQLSSRVADLYDQYLVYRPEWLTRWEAGQSVDGLDEAQRWQAPLWRALVEHTAALG
QPHWHRANLYQRFIDKLESAQARPAGLPSRVFICGISALPPVYLQALQALGKHIDVHLLF
TNPCRYYWGDIKDPAFLAKLITRQRRHHREARQFPLFRDSQTAGSLFNDEGEQDVSNPLL
GSWGKLGRDNIFLLAGMERYEELDAFVDITPGTLLQNIKYDILELKNAAVAGVTAEEFSR
SDKKRRLQPGDRSVTVHVCHSPQREVEILHDRLLAMLDADPDLTPRDIVVMVADIDSYSP
YIQSVFGSASGERYVPYAISDRRARQAHPALQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFNINEEGLRYLRLWVNESGIRWGMDDDNVRELALPPTGQHTWQFGLTRMLLGYAMESR
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCREMLNDFFL
PDPDTEAALALIEQQWQEIIAKGVGANYGEAIPLSLLRDELAQRLDQERISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMSQKPQRGDRSRRDDDRYLFLEAL
ISAQQQLYISYIGRAIQDNKERFPSVLVQELVDYIGQSHYLPGDEAANCDESEARVKAHI
THLHTRMPFDPANYVADEWQSYARDWLPAANQQGETHPAFIQPLAPLPLQTLAFDQLQRF
WAHPVRAFFQMRLQVNFRPEESEIPDAEPFVLDGLSRYQLNNELLNALVEQQDAEKLFRR
YRAAGALPYGAFGEIFWETQCQEMQALASRVSELRQPADSLEIDLHCAGVHLTGWLPRVQ
ADGLLRWRPSLLSVSQGVQLWLEHLVYCASGGTGESRLFVRKDGEWRFPPLEPDHAMHYL
ALMIDGYREGMAKPLLLLPESGGAWIKVCYDAANDAMVMDDETLQKAQGKFLQAYEGNMM
VRGEGDDLWYQRLWRTLEPEYYAEITEQAQRFLLPLYRHNQSG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtttatcactccaatcgtctggatgtgctggaagcattgatggagtttatt
gttgagcgcgatccgcttgacgatccctttgagcctgaggtcgtcctggtgcagagcacc
ggtatggcgcaatggctgcaaatgacgctggcgcagaaatttggcattgccgccaatatc
acgtttcctcttccggcgagctttatctgggacatgttcgtcagtgtgctggacgatatt
ccgaaagagagtgcgtttaacaaacaaagtatgagctggaaactgatgtcgctgctgcca
ggcatgttgcagcgcgaagagttcgcgatgctgcatcattacctgagtgacgatgatgat
aagcgaaagctctttcagctctcttcccgtgtggcggatctctatgaccaataccttgtt
taccgcccggagtggctaactcgctgggaggcggggcagagcgtagatggtctggatgag
gcgcaacgctggcaagcaccgttatggcgtgcgttggtggagcacactgccgctctcggt
cagccacactggcatcgcgctaatctgtatcaacgttttatcgataaactcgaatcagcc
caggcgcgtcccgcaggacttccctcccgggtttttatttgtgggatttccgctctgccg
ccggtttacctgcaagcattacaggcattgggtaagcatatcgatgttcacctgctattc
actaacccttgtcgctactactggggcgacatcaaagatcccgcatttttggcgaaactt
atcacccgccagcgtcgacatcaccgggaagcccggcagtttccgctgtttcgggattcg
caaactgccggcagtttattcaacgacgagggagaacaggatgtcagtaacccgctgctt
ggctcatggggcaaactgggtcgtgacaatatctttttgttggcgggaatggaacgctac
gaggaactggatgcgtttgtcgatataacgcctggtacactgctacaaaatattaaatac
gacattcttgaattaaaaaacgccgctgtagccggggtgaccgcagaagagttttcccgc
agcgataaaaaacgcaggctacaaccgggcgatcgtagcgttacggtacatgtctgtcac
agcccacagcgggaagttgagatcttgcacgatcgtttactggcgatgctggacgccgat
cccgatctgaccccgcgcgatatcgtggtgatggtggcggatattgatagctacagtcct
tatattcagtcggtgtttggcagcgccagcggtgaacgctatgtgccttatgccatttcc
gaccgtcgcgcccgccaggcgcacccggcgttgcaggcgtttattagcctgctgtcgttg
ccagacagccgtttcgtgtcagaagatgtgctggcgttgttggatgtgccggtactggct
gcacgtttcaacatcaacgaagaggggctgcgctatttgcgcctgtgggtaaacgagtcg
ggcattcgctgggggatggatgacgataatgtgcgcgaactggcgttgccgccaaccggt
cagcacacctggcagtttggtctcacgcgtatgcttctgggttacgccatggagagtcgt
caaggcgagtggcagtctgttctgccttacgatgaatccagcgggctgatcgcagaactg
gtgggtcacctggcgtcactgctgatgcaactgaatatctggcgccgtgggcttgcgcag
gaacgcccgctggaggagtggttgccggtttgccgtgaaatgctgaacgattttttcttg
ccggatccggacaccgaagcggcgcttgcgctgatcgaacagcagtggcaggagatcatc
gccaagggcgtgggagcaaactacggtgaagcaatccccctttctttgttgcgtgatgaa
ctggcgcagcgcctggatcaggagcgtatcagtcagcgttttcttgcaggaccagttaat
atctgcactctgatgccgatgcgttcgatcccttttaaggtggtctgcttactggggatg
aacgatggcgtttatccgcgaacgctgccgccgctggggtttgatttaatgagtcagaaa
ccccagcgtggcgatcgtagtcgtcgtgatgatgaccgctatctgttccttgaagcgctg
atttccgcacaacagcagctctatatcagctatatcggtcgtgccattcaggataacaaa
gaacgtttcccttcggtgctggtgcaggaactggtggactacatcggtcaaagtcactat
ctgcccggtgatgaggccgcgaactgcgatgagagtgaagcgcgggtgaaggcgcatatc
actcatctgcatacccgtatgccgttcgaccccgcgaattatgttgctgatgagtggcag
agctatgcacgcgactggttgccggccgcaaaccagcagggcgaaacacatcctgctttt
attcagccgctggcaccactaccgctgcagacgctggcctttgaccagcttcagcgtttc
tgggcgcacccggtacgcgcttttttccagatgcggttacaggttaacttccgcccggaa
gagagtgaaattccggatgcggaaccttttgtgctggatgggctaagccgttatcaactg
aataatgaactgcttaacgcgctggttgaacagcaggatgcggaaaaattgttccggcgt
taccgggcagcgggtgcactgccttatggcgcctttggcgagatcttctgggagacgcaa
tgccaggagatgcaggcactggccagccgtgtcagcgagttgcgccagcctgccgatagc
ctcgaaatcgacttacattgtgccggtgtacatttaaccggctggttgccgcgcgtacag
gcagatggcctgctacgctggcggccctcgctattgagcgtttctcaaggggtgcaactt
tggctggagcatcttgtctactgtgccagcgggggaaccggcgagagccgactgtttgtg
cgcaaagatggcgagtggcgcttcccgcccctggagcctgaccatgcaatgcattatctg
gccctgatgattgacggataccgggaaggcatggcaaaaccgttattactgctgccggaa
agcggcggtgcatggataaaagtctgttatgacgcggcaaatgatgccatggtaatggat
gacgaaacgttacaaaaagcgcagggcaaatttctgcaggcgtacgaaggcaatatgatg
gttcgcggcgaaggcgatgatctctggtatcagcgtctgtggcgcacccttgaacctgaa
tattatgcagaaatcactgaacaggcgcagcgtttcctgttaccgctttatcggcataat
cagtctggttga
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