Kosakonia oryzendophytica: O9K67_04665
Help
Entry
O9K67_04665 CDS
T08786
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O9K67_04665 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_04665 (recD)
Enzymes [BR:
koo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
O9K67_04665 (recD)
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O9K67_04665 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Helicase_RecD
Viral_helicase1
UvrD_C_2
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
UvrD_C
AAA_28
MukB
AAA_33
CoaE
CbiA
PhoH
DEAD
SRP54
T2SSE
AAA_24
DO-GTPase1
NTPase_1
AAA
TrwB_AAD_bind
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WBT59096
LinkDB
All DBs
Position
972443..974275
Genome browser
AA seq
610 aa
AA seq
DB search
MSMTTLLREAAQQKLLRPLDVQFALTVTTEDEPAVMLAAALLSHEAGEGHVCMPLARLTP
EAFAHPSTLLAQLFECAGQPDDWQATLLASPAVSEGYAPTPLILSDGRLYLNRMWCNERQ
VAAFFAQENTPLAVDEVRLTQALTSLFPATDDVNWQKVAAAVALTRRISVISGGPGTGKT
TTVAKLLAALVQMVDGDKCRIRLAAPTGKAAARLTESLGNALRQLSLNEQQKAMLPDEAS
TLHRLLGAQPGSQRMRHHAGNPLHLDVLVVDEASMIDLPMMSRLIEALPPHARVIFLGDR
DQLASVEAGAVLGDICAWVNAGYTAERAAQLTRLTGCAVPAGDGSAASALRDSLCLLQKS
YRFGSDSGIGQLAAAVNRGDKSATRDVFGQGFSDIERKPLQSTEEYQQMLDDALAGYARY
LSLVHSNAAPAEVIAAFGEYQLLCALREGPFGVSGLNERLEQALLRQRQITRLPHSRWYH
GRPVMIARNDSSLGLFNGDIGIALEQGQGIRVWFPLPDGTIKSVQPGRLPEHDTAWAMTV
HKSQGSEFDHAALILPQQIIPVVTRELVYTAITRARKRLSLYADERVLMQAITSRTERRS
GLEALFRRMM
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgacgaccttattacgtgaagcggcgcagcagaagttgctgcgtccgttggac
gttcagttcgcccttactgtgaccaccgaagatgagccagccgtcatgctggcggctgca
ctgctcagccatgaagcgggggaagggcatgtctgcatgccgctggcgcgtcttacgcct
gaggcgttcgctcacccctcgacgctattagcgcaattgtttgaatgcgccgggcaaccg
gatgactggcaggcaactctactggcctctcccgctgtgagtgagggatatgcccccacg
ccattgatcctctccgacgggcgtctctacctgaaccgaatgtggtgcaacgaacggcag
gtcgctgcattctttgcgcaagagaacacgcccctggcggttgacgaggtgcgcctgacg
caggcccttacatcactatttccggctaccgatgacgtcaactggcagaaagtggccgcc
gccgttgcgttaacccggcggatttcggtgatttccggagggcccgggaccggcaaaacc
accaccgtggcgaaactgcttgctgcgctggtgcagatggttgatggcgacaagtgtcgt
atccgcctcgcggcgccaaccggtaaagccgccgcacgattaaccgagtcgctgggtaat
gcgctgcgtcagctgtcgttgaatgagcaacaaaaagcgatgctgcccgatgaggccagc
acactgcaccgattattgggcgctcagccggggagccagcgcatgcgccatcatgcgggt
aacccgctgcatctggatgtgctggtcgttgacgaagcctctatgatcgatttgccgatg
atgtcgcggttgattgaggcgctaccgccgcatgcccgggtgattttccttggcgatcgc
gatcaactggcgtcggtggaggccggcgctgtgctgggggatatctgcgcctgggttaat
gctggttacacggcggaacgcgcagcacaattgacgcgcctgaccggctgtgcggtaccg
gcgggagacgggagcgcggccagcgcactgcgtgacagtttgtgtctgctgcaaaaaagc
tatcgcttcggcagtgattccggcattggtcagcttgctgctgcggtaaaccggggggat
aaatccgccacccgggacgtgttcgggcaggggtttagcgatattgagcgtaagccgtta
cagtcgacggaagagtatcagcagatgctggatgatgcccttgccggttatgcccgttat
ctctcgctggtacacagcaatgcggcgcctgcagaggtgatcgcagcgtttggcgaatac
cagttgctgtgcgcattgcgggaagggccattcggcgtaagcggcttgaatgagcgactt
gagcaagcgttattacgccagcggcagattacgcgattgccgcactcccgttggtatcac
gggcgaccggtaatgatcgcacgtaatgactcatcgctggggctgtttaacggtgacatc
ggcattgcgcttgagcaggggcaggggatccgcgtctggtttccgctgccggatggcacc
attaaatcggtgcagccagggcgtttaccggagcacgacactgcgtgggcgatgaccgtg
cataagtcgcagggatcggagttcgatcacgccgcgctgatcctgccgcagcagatcata
ccggtagtgacgcgtgagctggtctataccgcgattacccgcgcgcgcaagcgcttatcg
ctgtatgcggacgagcgtgtgttgatgcaggccatcacctcccgtacggagaggcgcagc
ggcctggaggcgttatttcgtcggatgatgtaa
DBGET
integrated database retrieval system
