Kosakonia oryzendophytica: O9K67_04780
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Entry
O9K67_04780 CDS
T08786
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
koo03016
]
O9K67_04780 (truD)
Enzymes [BR:
koo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
O9K67_04780 (truD)
Transfer RNA biogenesis [BR:
koo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
O9K67_04780 (truD)
Prokaryotic type
O9K67_04780 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WBT59117
LinkDB
All DBs
Position
996824..997873
Genome browser
AA seq
349 aa
AA seq
DB search
MIDFENLTWLHGKPTATGILKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIPAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSAFELEGCKVLEYARHKRK
LRLGALQGNAFTVVLREVSDRADVESRLQAIAERGVPNYFGAQRFGIGGSNVQGALRWAQ
SNAPVRDRNKRSFWLSAARSALFNQMVSERLKKPDFNQVVDGDALQLAGRGSWFVATEDE
RADVQARVDAKALMITASLPGCGEWGAQREALAFEQHAIADAPELQALLVREKVEAARRA
MLLYPQSLRWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattttgagaatctgacctggttgcatggcaaaccgacagcgacgggcatttta
aaagccaacccggaagattttgtggtggtggaagatctcggtttcgagccagacggcgag
ggcgagcatattcttgtacgtattctgaaaaacggctgtaacacgcgttttgttgcggat
gcgctggcaaaattccttaaaattcccgcgcgggaagtgagttttgccgggcagaaagat
aagcatgctgtcacagagcagtggttgtgcgctcgtgtgccggggaatgccatgccggat
ctcagcgcctttgagctggaagggtgcaaagtgctggagtatgcccgtcataaacgtaag
ttgcgcctcggtgctttgcagggtaatgcgtttacggtggtattgcgtgaggtgagcgat
cgcgcggatgtcgaatcacgtttgcaggccattgcggagcgcggtgtgccgaactatttc
ggcgctcagcgctttggcattggcggcagtaacgtccagggcgcgttgcgctgggcgcaa
agcaatgccccggtgcgcgatcgcaacaaacgcagtttttggttgtcggcggcccgcagt
gcgttgtttaatcaaatggttagcgagcgtctgaaaaaaccggactttaatcaagttgtt
gacggcgatgcgctacaattagcggggcgcggaagctggttcgtcgcaaccgaggacgaa
cgcgctgacgtgcaggctcgcgtggatgccaaagcgttaatgatcaccgcatcgctgcct
ggctgcggcgaatggggagcgcagcgtgaggcgctggcctttgagcaacacgctatcgcc
gacgcgccggaattacaggcgctgctggtgcgggaaaaagtcgaggcggcgcgccgcgcg
atgctgctttacccgcagtcgcttcgctggaactggtgggatgacgttaccgtcgagcta
cgtttctggctcccggcgggaagttttgccaccagtgtggtcagggaacttatcaacaca
tcgggtgattatgcgaatattgctgagtaa
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