KEGG   Kosakonia oryzendophytica: O9K67_06425
Entry
O9K67_06425       CDS       T08786                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
koo  Kosakonia oryzendophytica
Pathway
koo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:koo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    O9K67_06425 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:koo03019]
    O9K67_06425 (rnc)
   03009 Ribosome biogenesis [BR:koo03009]
    O9K67_06425 (rnc)
   03036 Chromosome and associated proteins [BR:koo03036]
    O9K67_06425 (rnc)
Enzymes [BR:koo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     O9K67_06425 (rnc)
Messenger RNA biogenesis [BR:koo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     O9K67_06425 (rnc)
Ribosome biogenesis [BR:koo03009]
 Eukaryotic type
  90S particles
   RNase
    O9K67_06425 (rnc)
 Prokaryotic type
  rRNA processing factors
   O9K67_06425 (rnc)
Chromosome and associated proteins [BR:koo03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     O9K67_06425 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: WBT59411
LinkDB
Position
1300916..1301596
AA seq 226 aa
MNPIVINRLQRKLGYTFHHQDLLQQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEIAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEQLILSWYQTRLDEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttcatcatcag
gatctgttgcagcaggcattaacccaccgcagtgccagtagcaaacacaatgagcgtctg
gagtttcttggcgactcgattttaagttttgtgattgctaatgcgctctatcaccgtttt
cctcgcgtggatgaaggtgatatgagccgcatgcgcgccacgctggttcgcggtaatacg
ttggcggaaatcgcccgcgaattcgaattaggcgaatgtctgcgcttagggccgggtgaa
ttgaagagcggcggttttcgccgtgaatccattctcgcggacaccgttgaagcattaatt
ggcggggtatttctcgatagcgatatccagaccgtcgaacaattaatcctgagctggtat
caaacgcgcctggacgaaatcagtccgggcgataagcaaaaagatccgaaaacgcgcctg
caggagtttttgcagggtcgccatttgccgctgccgtcctatctggtggtgcaggtgcgc
ggtgaagcacatgatcaggaatttactatccactgccaggtcagcggcctgagcgaaccg
gtggtcggcacaggttccagccgccgtaaggcggagcaggctgccgccgaacaggcgctg
aaaaaactggagctggaatga

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