Kosakonia oryzendophytica: O9K67_07955
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Entry
O9K67_07955 CDS
T08786
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koo03032
]
O9K67_07955 (gyrA)
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_07955 (gyrA)
Enzymes [BR:
koo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
O9K67_07955 (gyrA)
DNA replication proteins [BR:
koo03032
]
Prokaryotic type
DNA Topoisomerases
O9K67_07955 (gyrA)
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
O9K67_07955 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Peptidase_M13_N
Motif
Other DBs
NCBI-ProteinID:
WBT59690
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Position
1634930..1637566
Genome browser
AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLEKETVDYVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDNEDISVEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVETDAKSGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMTLKEILAAFVRHRRE
VVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRRAPTPAEAKAGLIAQPWDLGNV
AAMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLEEYKE
LLEQIAELLHILGSAERLMEVIREELELVREQFGDARRTEITANTADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGVNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTSGNDEVMLFSAAGKVVRFKDSAVRAMGRTATG
VRGIKLAENDSVVSLIVPRGEGAILTVTQNGYGKRTAETEYPTKSRGTQGVISIKVTERN
GAVVGAVQVDDSDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGSIAEGDDDIAPEADTDDDVADDDAE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggttaacatcgaggaagagctgaaaagctcc
tatctggattatgcgatgtcggtcattgttggccgtgcgcttcctgacgtccgagatggc
ttaaaaccggttcaccgtcgcgtactttacgccatgaacgtattgggcaatgactggaat
aaagcctacaaaaaatctgcccgtgtcgttggtgacgtaatcggtaaataccatcctcat
ggtgattccgcggtgtatgacaccattgtccgtatggcgcagccattctcgctgcgttac
atgctggttgatggtcagggtaacttcggttctatcgatggtgactctgcggcggcgatg
cgttatacggaaatccgcctggcgaagatcgcccatgaattgatggccgatctggaaaaa
gagacggtagattacgtcgataactacgacggtaccgaaaaaattcctgatgtaatgcct
accaagatcccgaacctgctggttaacggttcttcgggtattgcagtcggtatggcgacc
aacattccgccacacaacctgacggaagtgatcaacggctgtctggcctatatcgacaac
gaagatatcagcgttgaagggctgatggagcatattccggggccggacttcccaaccgcc
gccattattaatggccgtcgcggcattgaagaggcttaccgcaccggtcgcggcaaaatc
tatattcgcgcccgcgcagaagtggaaaccgatgcgaaaagcggtcgtgaaacgatcatc
gttcacgaaattccgtatcaggtgaacaaagcgcgtctgatcgagaagatcgccgagctg
gtaaaagacaaacgcgtggaaggcattagcgcgctgcgtgacgagtctgataaagacggc
atgcgcatcgtgattgaagtgaagcgcgatgcggtgggtgaagtggtgctgaataacctc
tactcccagacgcaactgcaggtctctttcggtatcaacatggttgcactgcaccacggt
caaccgaagatcatgacgctgaaagagatcctggcggcgtttgttcggcaccgccgtgaa
gtggtgacgcgccgtacgatttttgaactgcgtaaagcgcgcgatcgtgcgcatatcctt
gaagcgctggcggttgcgctggcgaatatcgacccgatcattgaactgatccgtcgtgcg
ccgacgccggcagaagcgaaagcaggcctgatcgcacagccgtgggatctgggcaatgtt
gccgctatgttggagcgcgcgggtgatgacgctgcgcgtccggagtggctggaaccggag
ttcgggatccgcgacgggaaatactatctgaccgaacaacaggcccaggcaattctggat
ctgcgcttgcagaaacttaccggccttgagcatgaaaaactgctcgaagagtacaaagag
ctgctggagcagatcgctgaactgctgcacattctcggtagcgcagagcgcctgatggaa
gtgatccgcgaagagcttgagctggttcgtgaacagtttggcgatgcgcgtcgcacggaa
attaccgctaataccgccgatattaatatcgaagacctgatcaaccaggaagacgttgtt
gtcacgctgtcgcatcagggctatgtgaaatatcagccgctgaccgattacgaagctcag
cgtcgtggtggtaaagggaaatccgctgcgcgtattaaagaagaagactttattgaccgc
ctgctggtggccaacacccacgatacgatcctctgcttctccagccgtggtcgtctgtac
tggatgaaggtttaccaactgccggaagcgagccgtggggcacgtggtcgtccgatcgtt
aacctgctgccgctggaaccgaatgaacgtattacggcgattctgccggtacgcgagtac
gaagagggcgttaacgtctttatggcaaccgccagcggtaccgtgaagaaaacggcactg
actgaattcagccgtccgcgttctgctggcatcatcgccgtgaacctgaacgaaggcgac
gagctgattggtgtggatctgacttcgggcaatgacgaagtgatgctgttctctgctgcc
ggtaaagtggtgcgctttaaagatagtgccgttcgtgcaatgggtcgtacggcgaccggc
gtacgcggcattaagctggcagaaaacgacagcgtcgtttcgctgattgttccgcgcggc
gaaggcgcaattctgacggtgacgcagaacggttacggtaaacgtacggcagaaaccgaa
tacccgactaagtctcgtggtacgcagggcgtgatttccatcaaggtcaccgagcgcaat
ggcgctgtggtgggcgcggtgcaggttgatgacagtgaccagatcatgatgattactgat
gccggtacgctggtgcgtacgcgcgtgtctgaaatcagcgtggtgggccgtaatacccag
ggcgttattctgatccgcaccgcggaagatgaaaacgttgtggggctgcaacgtgtggct
gagccggtggacgacgaagagctggactccatcgacggtagcatagcggaaggggacgat
gatatcgcgccggaagctgacactgatgatgatgtcgcagacgacgacgccgaataa
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