Kosakonia oryzendophytica: O9K67_11965
Help
Entry
O9K67_11965 CDS
T08786
Name
(GenBank) PAS domain S-box protein
Organism
koo
Kosakonia oryzendophytica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CHASE
PAS_4
PAS
PAS_9
PAS_3
HATPase_c
HisKA
PAS_8
Hpt
PAS_7
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WBT60434
LinkDB
All DBs
Position
2454552..2459057
Genome browser
AA seq
1501 aa
AA seq
DB search
MQPSGNNYQIQEKRRPQLVTIITLVAGLLLTLVAVLVVHRLNEQHIRQSVIKNAEPQFNE
LMERVNRYRYGLYEARTAVLSSGGREVTDQGFVGFAQSLDLSRDFPGARGFGFIRRVPHL
KLADYLAEERKEGRPDFRIYSIGLNQHEHYIIEYMEPAAVSSNANIIGLDIASEYMRKLA
ADNAMLSGDAVITSPLTLKYSSPQQLDAFLILLPIYDGAKTPATAMERMQRGFGWAFAPL
NVHEILAGSGIRNDQLILSLQDATNPQDVEEFYRNSSEQGLYPYSKDIPVLGRIWRFTLT
VTPAWVAGLNLLSPVWIALLGGGMTLILVMLVNIAVSRNADRKRLLIEQNKLTLIVESSV
DAIIGKDTTGTVISWNKGAERMFGYTRQEAIGQKMVDLIIPARLKEEESQILQRVMSGQP
IESLETVRHRKDGSELTVATTIAPICSADGKVIGASKSVRDISLQKEAEQRIRDLNINLE
QQVRQRTEELATVNAMLSTVLSATYEFMIIATDLDGTIRLFNRGAERMLGYCEADMVGKA
TPEILHVPEEILARSKQLSEQYNEDIQGFDVLIYHTRNGRPEHFEWTYQHKDGTRFPVNL
VVTAMRDANGAIIGYLGIAADITQQRQAQQALEATRDQLLSTTQTLLIASKTAELGIWSW
NIATDALEWNDKMYELYDLPPSLAENGLTFQRWASRIHPEDVDIAVNDLRRAIVTHDEYL
PTFRILRSDNSQHFIQAAANIEYDSNGQPVRVTGINQDITEDRLLKLHLIEAKEQADAAN
AAKSLFLANMSHEIRTPMNAVLGMLQLLLKTGLTQKQHDFAFKAHVAATSLLSLLNDVLD
YSKIDAGKLELDLNPLDLHSLMQQLAIILSGNLRNKSVELLFDLDNSLPPNIIGDAQRLQ
QILINLVSNAIKFTEKGEVIVQTRLLALSEQSVDVRISVSDTGIGISEAQQKRIFDVFTQ
AETSTSRRYGGTGLGLVISRRLVEQMGGILTVDSELGHGSTFAFELHFPRDTRVTWQPLH
ISGDTPRVLVVDDNLIARTLIVDMLRAMHVQADSTPSAAEAIRKVKAASDASTPYDTVLL
DWIMPEMDGIALAEHIRHDMQLPRIPSLILLSAAHHEDLPDTGAHSPLDKVLSKPITPQQ
LLDAISTASASDKSHTSPDPAASHMLAGLSLLVVEDNAFNQTVVRELLMSEGALVTIASG
GEEGVNTVIQGRQRFDMVLMDLQMPDIDGFEATRRIRANPAFATLPIVAMTANVSESDKQ
NCLAAGMDGHISKPLVFTDVIAVILQISGRQTHAVEAAADVKPASNQLLQRFGGNLIIYQ
KLLRAFMPSFSELVTALRDARRNEDWPAAMMALHTLKGTTGSVGLDNLYHYVVNSESALK
TAREQDKARQLDEILAQIEDLAQEEHRNISQWVAGMMPAPDVPEPAQVELDRLIDDLSQS
LNSSNMKAVDQAEQLAWQLSQNPAWQSFAEALVQATENLDFNRAKQVLEQIKEVRDVEKN
A
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgcagccatcgggaaataactatcagattcaagaaaagcgccgcccacaactggtaacg
ataatcaccctggtggcagggttgctgcttacattggtggccgttctggtggtgcaccgg
ctgaatgaacagcatatccggcaatcggtcattaaaaatgcagagccacaattcaacgag
ttaatggaaagagtcaaccgatatcggtatggcctgtacgaagcccgcacggcagtcctc
agtagcggtggccgcgaggtgacagaccagggttttgtcggttttgcccaatcgttagat
ttgagcagagacttcccgggggcaagaggctttgggtttattcgcagagtaccgcacctg
aaacttgctgattatctggctgaagaacgcaaagaaggtcgccccgatttccgaatctac
tccatcgggctgaaccagcacgaacattacattattgaatatatggagcctgctgccgtc
agcagtaacgcgaatatcataggcctggatattgcgtcagaatatatgcgcaagctggcg
gcggataacgccatgctgagcggcgatgccgttatcacatcacccttaaccctgaaatat
tcttcaccccagcagctggatgcatttttaattctgctgcccatctatgacggcgcaaaa
acccccgccaccgccatggaaagaatgcagcgcggttttggctgggcttttgcgccatta
aatgtgcatgaaattctcgcggggtccggcattcgtaatgaccagctcattttgtcgctg
caggatgcaaccaatccacaggatgttgaggagttttaccgcaacagcagtgaacagggg
ctttatccctacagcaaagatattccggttctgggcaggatctggcgttttacattgacc
gttacacccgcctgggtcgccgggctgaatctgctttccccagtgtggatcgcgctgctg
ggcggggggatgacgctgatcctcgttatgctggtcaatattgccgtctctcgcaatgcc
gatcgtaaacggctgctcattgagcaaaataagctcacgctgattgtggaaagctccgtt
gatgcaattatcgggaaggacaccaccggaacagtgattagctggaataagggggccgaa
cgcatgtttggctatacccgccaggaagctatcgggcagaagatggtggacttgattatc
cccgcgcggctgaaagaagaagagagccagatcctgcaacgggtgatgtccgggcagcct
atcgaaagcctggagacggtgcgccatcgcaaagatggctcggagctgactgtcgctaca
acgatagcccccatctgttccgctgacggaaaggtcattggcgcatcgaaaagtgtgcgg
gacatttcactccagaaagaagcagagcagcgcatccgcgatcttaatatcaatctggag
cagcaggtcaggcagcgtaccgaagagttggccaccgtcaacgcaatgctcagcacggtg
ttatccgccacgtatgaatttatgatcattgccaccgatctggatggcaccatccgtctg
tttaaccgtggcgcggagcggatgctgggctactgcgaggcggatatggtggggaaagcg
acgccggaaatactgcatgtgccagaagaaatcctcgcgcggagtaaacaactcagtgaa
caatataatgaagatattcaagggtttgatgtcttaatttaccatacgcgcaatggtcgt
ccggaacattttgagtggacctatcagcacaaggatggtacgcgtttccccgtcaatctg
gtggtcacggcgatgcgcgatgctaacggcgcgatcattggttatctcggtattgcggcg
gatattacgcaacagcgccaggcccagcaagcgctggaggccacccgcgatcagttattg
tcgaccacacaaaccctgctgattgcttcgaaaacggcggagctggggatctggagctgg
aatatagccaccgatgcgctggagtggaacgacaagatgtatgagctttatgatttgccg
ccatcgcttgcggaaaacgggttaacattccagcgctgggcctcgcgtatccatccggaa
gatgtcgacattgcggtcaatgatctgcgccgcgccattgtcacgcacgatgagtatctt
ccgacatttcgcattcttcgtagtgataactcgcagcactttattcaggctgccgccaac
attgaatacgacagcaacggtcagccggttcgcgtgaccggaataaatcaggacattacc
gaagatcgcttactgaaattgcatttaattgaagccaaagaacaggccgatgcggcgaac
gccgcgaaatccctgttccttgccaatatgagtcatgaaatccgtacgccgatgaatgct
gtgttgggtatgctgcaactgctgctgaaaaccgggctaacgcaaaaacagcatgatttc
gctttcaaggcacatgtcgccgcaacatcgctccttagtttgctgaatgatgtcctggac
tactcaaaaattgatgccggtaaactggaactggatctgaatccgctcgatttgcacagt
ctgatgcagcaactggcaatcattctttccggtaatttgcgtaacaaatccgtggagctg
ctgttcgatctcgataattccctgccgccgaacatcattggtgatgcacagcgattgcag
caaatcctgatcaacctggtcagcaatgcgatcaaattcactgagaaaggggaagtgatt
gtacaaacccgactgctggcgttatctgagcagagtgttgatgtgcgtatcagcgtgtct
gataccggcattggcatcagcgaagcgcagcagaaacggatatttgatgtgtttactcaa
gccgaaacctcgacctcacggcgctatggcggaaccggactggggctcgttattagccgt
cgtctggttgagcaaatgggcggcatactcaccgttgacagtgagcttgggcatggcagt
accttcgcctttgaactgcacttcccgcgcgatacccgcgtcacctggcagcctctgcac
attagcggtgacacaccgcgcgtactggtggtggacgataatctgattgcccgaacgctg
atcgtggacatgttgcgcgcaatgcatgtccaggccgacagcacgcccagcgccgccgag
gctatccggaaagtgaaagccgcctccgatgccagtacgccttacgatactgtgttgttg
gactggatcatgccggagatggacggcattgctctggcagagcatattcgtcatgacatg
cagttgccgcgcataccctcgttgattttactcagtgcagcgcaccatgaagatctgccg
gataccggtgcgcactcgccgctggataaagtcctgtcgaaacccatcaccccgcagcaa
ttactggacgccataagcacagcgtctgccagcgataaatctcacaccagccctgacccg
gccgcgagtcatatgctggccggtttgtctttactggtggtggaggataatgcgtttaac
cagaccgtagtcagagagctgctgatgagcgaaggcgcgctcgtgactattgcctccggg
ggagaagagggggtcaatacggtgattcaggggcgccagagattcgatatggtactgatg
gatttgcaaatgccggacatcgatggctttgaagccacccgaaggatacgcgcgaatccg
gcattcgcaacgttgccgattgtggcgatgacggcgaacgtaagcgaatcagataaacag
aattgccttgctgccggtatggacgggcatatcagtaaaccgctggtgttcacggatgtg
attgccgtgatcctgcaaattagcgggcggcagacccacgccgtcgaggctgccgctgat
gtaaaaccggcctcgaaccaactgttacagcgttttggcggaaacctgatcatttatcaa
aaattactgcgcgcatttatgccatcgttttccgaactggtgaccgctttacgagacgcg
cgccgcaatgaagactggccagccgcgatgatggcgctgcataccctgaagggaaccact
ggctccgtcgggctggataatctctatcactatgttgttaacagcgagtcggcattaaaa
actgcccgtgagcaggataaagcccgacaactggatgagatacttgcacagattgaagac
ctggcacaggaagagcaccgcaatatcagccagtgggtggcaggcatgatgcccgccccg
gatgtacctgaacctgctcaggttgagttggacaggctgatagatgacctgtcgcagagt
cttaacagcagcaatatgaaggccgtcgatcaggcagaacaactcgcctggcaactgagt
cagaacccggcatggcagtcattcgcggaggcgcttgttcaggcgaccgaaaatctcgac
tttaacagggcgaagcaggtgctggagcagattaaggaggtgcgggatgtggaaaaaaat
gcttga
DBGET
integrated database retrieval system
