Kosakonia oryzendophytica: O9K67_12280
Help
Entry
O9K67_12280 CDS
T08786
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
koo02000
]
O9K67_12280
Transporters [BR:
koo02000
]
Other transporters
Pores ion channels [TC:
1
]
O9K67_12280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
WBT60492
LinkDB
All DBs
Position
complement(2524852..2526960)
Genome browser
AA seq
702 aa
AA seq
DB search
MTIFSITRLTLPALLLPALVPPSAFADEQTLIVSATPHTVSELDTPAAVSVVQGDDIRQA
TPRVNLSESLGSVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGVRGIRMYVDGIPATMPDG
QGQTSNIDLNSVESIDVLRGPFSALYGNASGGVVNVTTQTGREPATIEASSYYGSDASWR
YGVKATGAMGDGTHAGDVDYTVSSTRFVTHGYRDRSGARKNLANAKLGVRIDDASKLSLI
FNSVDINANDAGGLTQSEWRNNPRQSPRAEQYDTRKTIKQTQAGLRYERQLSAHDDLSVM
MYAGERETTQYQSIPRAPQLNAQHAGGVIDLARHYQGIDTRWTHRGELGVPVTFTGGLNY
ETMTEQRKGYENFVMSGTTPLYGREGNLRRDERNLMWNVDPYLQTGWQLTEKLALEAGVR
YSSVWFDSNDHYITARNGDDSGEANYHKWLPAGSLKYAITDAWNVYVAAGRGFETPTINE
LSYRSDDQSGLNFALKPSTNDTVEVGSKTRIGNGLLTAALFRTDTDNEIVTDTSSGGRTT
YKNAGKTRRQGAELSLDQQFAGNWRAKVAWTYLDATYRSEVCNDADCNGHRMPGIARNMG
FASLGWIPDQGWYAGADVRYMSDLMADDENTAKAPSYTVAGLNTGYKFRYGNWMMDLFGR
IDNLFDREYVGSVIVNESNGRYYEPAPGRNYGVGLSVAYQFE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgactattttttccatcaccaggctcactttgccggccttgctgctcccggctctggtg
cccccttcggcttttgccgatgaacaaaccctgattgtcagcgccacaccccacaccgtt
tctgaactggatacgcctgctgctgtgagcgttgttcagggcgatgatattcgccaggcc
acgccacgggtcaatttgtctgagtcactgggcagtgtccccggtttgcaggtacagaat
cgccaaaactatgcacaggacctgcaattgtctattcgcgggtttggttcccgctcaacc
tatggcgtgcgcggtatccgcatgtatgttgacggcatccccgccaccatgccggatggc
caggggcagacatcgaatattgacctcaacagcgtggaaagtattgatgtattgcgcggc
ccgttctcggcgctttacggtaacgcgtctggtggtgtggtgaatgtcaccacgcaaacc
ggaagggaaccggcgacgattgaagccagcagttattacggtagcgacgccagttggcgc
tatggagtgaaagccaccggcgcgatgggtgatggcacccatgccggggatgtggattac
actgtctccagtacccgttttgtgacgcacggttatcgcgatcgcagcggtgcacgtaaa
aatctggcgaatgccaaactgggcgtacgcattgatgatgccagcaaactgagcctgatt
tttaacagcgtggatatcaacgccaacgatgcgggaggcttaacccaatccgagtggcga
aacaatccgcgccagtctccacgcgccgaacagtacgacacacgcaaaaccattaaacaa
acccaggcgggtttacgctatgaacgccagctcagtgcacacgatgacctgagcgtgatg
atgtatgccggagagcgtgaaaccacgcaatatcagtccattccccgggcgccacaactg
aatgcgcagcatgccgggggtgtgatcgacctggcgcgtcactatcaggggatcgataca
cgctggacgcatcgcggtgagctgggtgtcccggtgacgtttaccggtgggctgaattac
gaaaccatgaccgaacagcgcaaaggctatgaaaactttgtgatgagcggcacgacgcct
ctttacgggcgtgaaggcaatctgcgccgtgacgagcgcaatctgatgtggaacgttgac
ccctatctgcaaaccggctggcagttaaccgaaaagctggcgttagaagctggcgttcgg
tacagctccgtgtggtttgactccaacgatcattacatcactgcgcggaacggcgatgac
agcggcgaggcgaattaccataaatggctcccggcggggtcgctgaaatatgccatcacc
gatgcctggaatgtgtatgtcgccgccggacgtggatttgaaacaccgaccattaatgaa
ctctcctaccgttccgatgaccagagcggactcaactttgcgctgaagccgtcgactaac
gatacggtagaagtcggcagtaaaacccgtatcggtaatggtttactgacggcggcgctg
ttccgtactgatacggataatgaaatcgtcaccgataccagcagcggaggtcgcacgacc
tataaaaacgccgggaaaacccgtcgccagggtgctgagctgtctctggatcagcagttt
gccggaaactggcgggctaaagtggcatggacctatcttgatgccacctatcgtagcgag
gtgtgcaatgacgccgactgtaacggtcaccgtatgccgggtattgcccgaaatatgggc
ttcgcttcgctgggctggatcccggatcaaggctggtacgccggtgcggatgtacggtat
atgagcgacttgatggcggatgatgaaaacaccgcgaaagcgccgtcttataccgtggcg
ggcctgaatacgggctacaaatttcgctatggcaactggatgatggatctcttcgggcgt
atcgataatctgtttgaccgcgaatatgtggggtcggtgatcgttaacgagtcgaatggg
cgttattacgaacctgcgccggggcgtaattacggtgtgggcttgtcggtggcttatcaa
ttcgaataa
DBGET
integrated database retrieval system
