Kosakonia oryzendophytica: O9K67_12460
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Entry
O9K67_12460 CDS
T08786
Name
(GenBank) TIGR04028 family ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
koo
Kosakonia oryzendophytica
Pathway
koo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O9K67_12460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
koo02000
]
O9K67_12460
Transporters [BR:
koo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
O9K67_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WBT56019
LinkDB
All DBs
Position
complement(2567382..2569004)
Genome browser
AA seq
540 aa
AA seq
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MHIAFRLPLLTALITVSSVQAFAAETPVKGGTLIYLEQQAHTNLYPPAGGFYPNGGILNQ
ITDKLTWQNPQTLQVEPWIAESWTTNADKTEYTFKIRPGVTFSDGTPLDAAAVAKNFDTY
GLGNKAQRLPVSEVINNYDHSEVIDAQTVKFYFKKPSPGFLQGTATIGSGLVSLSTLQRN
FDELGDARHIIGSGPFVVTDEKLGREVTLQARKAYQWGPKNSAQQGPANLDGIKFIVTPE
DSVRIGALLAGQAGFIRQVQAYDEKQATEQGFAIYAPPTRGVNDSISFRPDNPLVADLRV
RQALLHATNAKQVVDTLFSANYPQATSVIAHSAAGYVNLSDALKFDPVKARQLLDDAGWK
TAANGIRTKEGQSLALTIYESLPQPQNKEVLQLVAQQWRQVGVALTVKAGDAGSRTLDNL
DPLKTPLTVSEVGRADPDVVKSMFYPANRDALLQQGGSSDKVKSFRDDKLNALLVNISAE
VDPQKRLQLTGDAQRYLLENAYVIPIFEEPQVFAGAPWVKNVNFEAVGRPSFYGAWIAKH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcgcttttcgtttaccgctgctgacggcgctgattaccgtcagttcggttcag
gcctttgcggcggaaacgccggttaaaggcggtaccctgatttaccttgaacagcaagcg
cacaccaatttgtatcccccggctggcgggttttaccctaacggcggcatcctcaaccag
atcactgacaagctgacctggcagaacccgcaaacgttgcaggtggaaccgtggattgct
gaaagctggaccaccaacgccgacaaaacggaatacacctttaaaattcgccctggcgtc
accttttcagatggcactccgcttgatgcggctgctgtggcgaaaaacttcgacacttac
ggactcggcaacaaagcgcagcgcttgccggtatcggaagtcattaataattacgatcac
agtgaagtgattgatgcgcagacggtgaaattctactttaaaaaaccgtcgccggggttc
ctgcaaggcactgcgacaatcgggtcagggctggtttccctcagcacgttgcagcgcaac
ttcgatgagctgggtgatgcgcggcatattatcggctccgggccgtttgtggtgacggac
gagaaactggggcgtgaagtgacgctacaggcgcgtaaagcgtatcagtggggaccaaaa
aatagtgcccagcaaggcccggccaatctggatggtattaaattcatcgttacgccggaa
gacagcgtgcgcattggcgcgttgctggcgggacaggccggttttattcgtcaggtacag
gcctatgatgaaaaacaggccacggaacaaggctttgccatctatgcgccgccaactcgt
ggcgtcaacgacagcatcagtttccgcccggataatccgctggttgccgatctacgcgtg
cgccaggccttactccatgcgacaaatgcgaaacaggtcgtcgacaccctcttctctgcc
aattacccgcaagccacttcggttattgcccactctgctgcgggttacgtcaaccttagc
gatgcactgaaatttgacccggtcaaagcccggcagttacttgatgacgcaggctggaaa
accgcagcgaacgggatccgcaccaaagagggtcaatcgctggcgttgaccatttatgag
tcactgccgcagccacaaaacaaagaggtactgcaactggtggcgcagcaatggcgtcag
gtcggcgtggcgctgacggtcaaagccggtgatgcaggcagccgcacgctcgataacctt
gacccgctgaaaacgccgcttaccgtttcggaagtcggccgtgccgatccggatgtggtg
aaaagtatgttctaccccgccaaccgcgacgcgctgctgcaacagggcggatccagcgac
aaggtaaaaagctttcgcgacgacaaactcaacgccttgctggtgaatatttccgccgaa
gttgacccacaaaaacgtctgcaactgaccggcgatgcgcagcgctatctgctggaaaat
gcctatgtgatccctatttttgaagagccgcaggtctttgctggcgcgccctgggtgaaa
aacgtcaactttgaagccgtggggcgtccatcgttttacggcgcgtggattgcgaaacac
taa
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