Kosakonia oryzendophytica: O9K67_13045
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Entry
O9K67_13045 CDS
T08786
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
koo
Kosakonia oryzendophytica
Pathway
koo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O9K67_13045 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
koo03000
]
O9K67_13045 (nifA)
Transcription factors [BR:
koo03000
]
Prokaryotic type
Helix-turn-helix
Other families
O9K67_13045 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
AAA_5
AAA
GAF_3
Mg_chelatase
AAA_2
HTH_23
AAA_3
AAA_16
Parvo_NS1
MCM
bpMoxR
TIP49
Motif
Other DBs
NCBI-ProteinID:
WBT56128
LinkDB
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Position
2695271..2696842
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AA seq
523 aa
AA seq
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MTQRTESGNPVWRFDLSQQFTAMQRISVVLSRATEIGQTLQEVLCVLHNDAFMQHGMICL
YDNQQSILSIEALQEADQELIPGSSLIRYRPGEGLVGTVLSQGQSLVLPRVADDQRFLDR
LGLYDYNLPFIAVPLMGLQSQPMGVLAAQPMARFEERLPACTRFLETVANLVAQTVRLMM
RPAATSPRATVINNERPRGCATARSFGFENMVGNSPAMRQTMEIIRQVSRWDTTVLVRGE
SGTGKELIANAIHHNSPRAGAPFVKFNCAALPDTLLESELFGHEKGAFTGAVRQRKGRFE
LADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLQVNVRIIAATNRNLEEEVR
LGNFREDLYYRLNVMPISLPPLRERQEDIADLAHFLVRKIAQNQSRTLRISDGAIRLLMS
YNWPGNVRELENCIERSAVMSESGLIDRDVIMFNHRENTPKQPPLTTSREDSWLDHSLDE
RQRLIAALEKAGWVQAKAARLLGMTPRQVAYRIQTMDITLPRM
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcgaaccgagtcgggtaatcccgtctggcgcttcgacctgtcccagcagttt
accgcgatgcaacgcatcagcgtggtcttaagccgggcgacagagattggtcagacatta
caggaagtgctgtgcgtgctgcacaacgatgcgtttatgcaacacgggatgatctgtctg
tacgacaatcaacaatccatcctcagtattgaagccttgcaggaagccgatcaggagttg
attcccggcagttcgctgatccgctatcggcccggagaagggctggtcggtacggtactg
tcgcaggggcaatcgttggtgcttccgcgcgtggctgacgatcagcgttttctcgatcgt
ctgggactgtatgactacaacctgccgtttatcgccgtgccattaatggggctgcaatca
caaccgatgggcgtgctggccgcgcagccgatggcgcgtttcgaggagcggttgcccgcc
tgcacacgttttctggaaacggtcgccaacctggtggcgcaaacggtacggctgatgatg
cgccccgccgccacctccccacgcgcaacggtgataaataatgaacgtccgcgcggctgt
gcgacggcacgctcgtttggttttgaaaatatggtcggcaatagcccggcgatgcgccag
accatggaaattatccgccaggtttcccgctgggataccactgtgctggtgcggggagaa
agcggtaccggcaaggagctgatcgccaatgctatccaccacaattcgccacgcgccggt
gcgccgtttgtgaaatttaactgcgctgccctgcccgataccctgctggaaagtgagctg
ttcggtcatgaaaaaggggcattcaccggtgcggtgcgccagcggaaaggccgctttgaa
ctggcggacggcggcacactgtttcttgatgagattggtgaaagcagcgcctcttttcag
gccaagctactgcggattttgcaggaaggcgaaatggagcgcgtcggcggtgacgaaacg
ctacaggtgaacgttcgtattattgcggcaaccaatcgcaatctggaagaggaagtgcgg
ctggggaattttcgggaagatctctactaccgtctcaatgtgatgcctatctccctgccc
ccgctgcgcgagcgacaggaagacattgctgatctggcacactttctggtgcgtaaaatc
gcgcaaaaccagagccgtacgctacgcatcagcgatggagccatccgcctgttgatgagc
tacaactggcccggcaacgtgcgtgaactggaaaactgcattgaacgctcggcggtgatg
tcggaaagcggtctgatcgatcgcgacgtgatcatgtttaatcaccgggaaaatacgccg
aagcaacccccgctcactacatcgcgggaggatagctggctcgatcactcactggatgaa
cgtcagcggttgattgccgcgctggaaaaagccggctgggtgcaggcgaaagcggcgcgt
ttactggggatgaccccgcgccaggtggcgtaccgcattcaaaccatggatatcaccttg
ccaagaatgtga
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