Kosakonia oryzendophytica: O9K67_14720
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Entry
O9K67_14720 CDS
T08786
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
koo03000
]
O9K67_14720
Transcription factors [BR:
koo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
O9K67_14720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
EAD2
HTH_29
Motif
Other DBs
NCBI-ProteinID:
WBT56442
LinkDB
All DBs
Position
complement(3043669..3044454)
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AA seq
261 aa
AA seq
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MHGLGLGGYDPDSQQEAAVAFSITVNEDEQRIPAHCHRKGQLILALKGAITCEVEHARWM
VPPHHAMWLPGLVPHSNHATPGAQLYFLFIEPWSVVMPQHCCTLKTSSLVRELIVALASR
SPAQRRQPATQRLVQVLFDELPEQPQMQLQLPVSSHPKIYQMVESMEADPAGRQTLAQWA
QTFAMSERNLARLVVKETGLSFRRWRHQMQLILALRLLIGGQSVQQIAHTLGYDSTTAFI
TMFKKGLGQTPGRYLSGVGGA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcacggactcggccttggtggttacgatcctgatagccagcaggaggcggcggtggca
ttcagcattaccgtcaatgaagatgagcagcggatcccggcgcactgtcatcgcaaaggg
cagttgattctggcgctgaaaggggcgatcacctgtgaagttgagcatgctcgctggatg
gtgccgccgcaccatgcgatgtggttaccgggccttgttccccacagcaatcacgccacg
ccgggggcgcaactctattttttgtttatcgaaccctggtcggtggtgatgccgcagcac
tgctgtacattaaaaacgtcttcgctggtgcgtgagcttattgtcgccctggcgtcacgt
tcgcctgcgcagcggcggcagcctgccacgcaacggctggtgcaggtgctgtttgatgag
ttgccagaacaaccgcaaatgcaactacagttgccggtgtcgtcgcacccgaagatttat
cagatggtggagagcatggaagccgatccagctggcagacaaaccctggcgcagtgggct
cagacgtttgccatgagtgagcgtaatctggcgcggttggtggtgaaagagacaggctta
agctttcgtcgctggcggcatcaaatgcagctgatccttgcgctgcgcttgctgattggc
ggccagtcggtacagcagatagcccacacgttagggtatgactcgacaacggcatttatc
accatgtttaaaaaagggctcggacagacgcctggccgttacctgagcggcgtgggtggt
gcgtaa
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integrated database retrieval system
