Kosakonia oryzendophytica: O9K67_14980
Help
Entry
O9K67_14980 CDS
T08786
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
koo
Kosakonia oryzendophytica
Pathway
koo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
O9K67_14980
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
koo01002
]
O9K67_14980
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
koo01011
]
O9K67_14980
Peptidases and inhibitors [BR:
koo01002
]
Cysteine peptidases
Family C82
O9K67_14980
Peptidoglycan biosynthesis and degradation proteins [BR:
koo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
O9K67_14980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
ATG5_UblB
Motif
Other DBs
NCBI-ProteinID:
WBT56484
LinkDB
All DBs
Position
3095020..3095985
Genome browser
AA seq
321 aa
AA seq
DB search
MIKNSRFAHWITLFAVAATVALSLPARANSWPLPPAGSRVVGENRFHVVLNDGGSLEAIA
KQYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRKGIVINLAELRLYYYPAGK
NEVIVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIDLPAVVPAGP
DNPMGHHAIRLAAFGGVYLLHGTNADFGIGMRVSSGCIRLRDGDISALYAAVSPGTPVNI
INTPIKVSVEPDGRRLVEVHQPLSKSIDDDPKTLPIVLNAAMQAFQDDARSDAQVMIHAM
EIRSGMPVDVSRHADPSVQML
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaattcgcgctttgctcattggataacgctcttcgctgttgccgcgacggtc
gccctttctctgcccgcacgggcaaatagctggccgttgccccccgcaggaagtcgcgtc
gttggcgagaaccgtttccacgtggtgcttaacgatggcggttcgctggaagccatcgct
aagcagtacaatgtcggttttctggcgctgctgcaggccaatcctggcgtggatccctat
gtaccgcgcgcgggcagcgtactgacgatcccgttgcaaaccctgctgccggacgcccca
cgtaaaggcattgtgattaacctggccgaactgcgtctgtattactatccggccggtaaa
aatgaagtcattgtctacccgatcggtattggccaactgggcggcgatacgctaaccccc
accatggtcacaaccgtctctgataaacgcgctaaccccacctggacgccaaccgccaat
attcgggcacgctataaagcccaaggcatcgatcttcctgccgttgttccagccgggccg
gataacccgatgggccatcacgctattcgtctggcggccttcggcggggtttatctgctg
catggcaccaatgccgatttcggcatcggaatgcgggtcagctccggttgcatccgcttg
cgcgatggcgacatctccgccctctacgcggcagtctcgccgggaacacccgtgaatatt
attaataccccgattaaagtctcggttgagcctgacggcagacggctggtggaagtccat
caaccgttatcaaaatccatcgatgacgatccgaaaacgctaccgattgtactgaatgcg
gcgatgcaggcattccaggacgacgcacgcagcgatgcgcaagtaatgatccacgcgatg
gaaattcgctctggcatgcctgttgatgttagccgccatgccgacccgtcggtacaaatg
ctgtaa
DBGET
integrated database retrieval system
