Kosakonia oryzendophytica: O9K67_16085
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Entry
O9K67_16085 CDS
T08786
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00541
Biosynthesis of various nucleotide sugars
koo01100
Metabolic pathways
koo01250
Biosynthesis of nucleotide sugars
Module
koo_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
O9K67_16085 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
koo01005
]
O9K67_16085 (kdsB)
Enzymes [BR:
koo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
O9K67_16085 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
koo01005
]
Lipid A
O9K67_16085 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
NTP_transferase
Motif
Other DBs
NCBI-ProteinID:
WBT56686
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Position
complement(3309760..3310506)
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AA seq
248 aa
AA seq
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MSFVVIIPARYASTRLPGKPLVDINGKPMVVHVLERARESGAERIIVATDNEAVKHAVEA
VGGEVCMTRVDHQSGTERLAEVVEKCGFSDDTLIVNVQGDEPMIPPAIIRQVADNLATRD
VGMATLAVPIHSAEEAFNPNAVKVVMDAEGYALYFSRATIPWDRDRFALSRETIGDTFLR
HIGIYGYRAGFIRRYVSWQTSPLEQIEMLEQLRVLWYGEKIHVAVASVVPGTGVDTQDDL
ERVRAELH
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgtggtgataattcctgctcgttatgcttcaacacgtctgccgggtaagccc
ttagtggatattaatggtaaaccgatggtggtgcatgtgctggagcgcgcccgtgagtcg
ggggctgaacgcatcatcgttgccacggataacgaagcggtgaagcatgcagtggaagcg
gtgggcggcgaagtctgcatgacccgcgtcgatcaccagtccggtactgaacggctggcg
gaagtggtggaaaaatgcggtttcagcgatgacactctgattgtcaacgtgcaaggtgat
gagccgatgatcccgccggccattattcgccaggttgcagataatctggccacacgcgat
gttggcatggcgacattggcggtgccgattcacagtgcggaagaagcgttcaatcctaac
gccgtgaaagtggtgatggatgccgaaggttatgcactctatttttctcgcgccaccatt
ccctgggatcgcgatcgctttgcgctttcccgcgaaacgattggcgatacctttctgcgc
catattggtatttatggttaccgcgccggttttatccgccgttatgtcagttggcaaacc
agtccgcttgagcagattgagatgctggagcaactgcgtgtgctctggtatggcgagaaa
atacatgtcgcagtggcgagcgttgtccccggcaccggtgtcgatacgcaagacgatctg
gaacgcgttcgggcagaactgcattaa
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