Kosakonia oryzendophytica: O9K67_19200
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Entry
O9K67_19200 CDS
T08786
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koo03032
]
O9K67_19200 (hupB)
03036 Chromosome and associated proteins [BR:
koo03036
]
O9K67_19200 (hupB)
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_19200 (hupB)
DNA replication proteins [BR:
koo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
O9K67_19200 (hupB)
Chromosome and associated proteins [BR:
koo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
O9K67_19200 (hupB)
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
O9K67_19200 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
WBT57252
LinkDB
All DBs
Position
complement(3959622..3959894)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDALIASVTESLKSGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgatagacaagattgccgcaggtgctgatatctctaaagctgcg
gctggacgtgcgttagatgctttaattgcttccgtgaccgaatcactgaaatccggggac
gatgtggcactggtaggttttggtactttcgcggttaaagagcgtgctgcccgtactggc
cgcaaccctcagaccggcaaagaaattaccatcgccgcagcgaaagttccggggttccgc
gcaggtaaggcactgaaagacgcggtaaactga
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