Kosakonia oryzendophytica: O9K67_19445
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Entry
O9K67_19445 CDS
T08786
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_19445 (sbcD)
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O9K67_19445 (sbcD)
Archaeal homologous recombinant proteins
O9K67_19445 (sbcD)
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Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Citrate_ly_lig
Motif
Other DBs
NCBI-ProteinID:
WBT57299
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Position
4014231..4015433
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AA seq
400 aa
AA seq
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MRIIHTSDWHLGQNFYSKSRATEHAAFLDWLLVAAEENQVDAIIVAGDVFDTGSPPSYAR
ELYNRFVVKLQQTGCQLVVLAGNHDSVATLNESKEILAYLKTTVVASAGVEPFWLYRRNG
EPGAIFCPVPFLRPRDLLVSQAGLSGQEKQQHLLAAITAYYQQQFTAASELRGDKPLPII
ASGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQKIGGDERIRYCGS
PIPLSFDETGKSKSVNLVTFDAGKLADVTALDVPATQALAVIKGDFAEICRQLEQWRDKP
GDAPVWLDIEIVSAEYLADMQRKIQQVTEDLPVEVLLVRRSREQRERILAGELRETLNEL
KVEEVFARRLAQEELDETQQGRLQALFSETLQALDEEKEA
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcacacctctgactggcacctgggtcaaaacttctacagcaagagccgc
gccactgaacacgccgcttttctcgactggctgctggttgcggcggaagagaaccaggtc
gacgccattattgtggcgggcgatgtttttgacaccggctccccgcccagctatgcccgt
gagctgtataaccgttttgtggtcaaacttcagcaaaccggctgccagttagtggtgctg
gcaggcaaccatgattcggtggccacgctcaacgaatcgaaagagatcctcgcctatctg
aaaactaccgtcgtcgccagcgcaggcgtagaacctttctggctttaccgccgcaacggt
gaaccgggcgcgatattttgcccggtgcccttcctgcgcccgcgcgaccttctggtcagc
caggcaggattgtccgggcaggaaaaacagcaacacctgctggcggcgatcaccgcgtat
taccagcaacaatttaccgcagccagcgagctgcgcggcgataaaccactgccgatcatc
gccagcggccacttaaccaccgtcggtgccagtaaaagcgacgccgtacgcgatatttat
atcggcacgctggatgcattcccggcgcagaacttcccgcccgccgactatatcgccctt
gggcatattcatcgggcgcaaaagattggcggtgatgagcgcatccgctattgcggctcg
ccgatcccactcagttttgacgaaaccggcaaaagcaaaagcgtcaatctggtgaccttt
gacgcaggcaaactggccgacgttaccgcactggatgttcccgccacgcaggcactggcg
gttatcaaaggcgattttgctgagatttgccgccagcttgaacagtggcgcgacaaacct
ggtgatgcgccagtctggctggatatcgaaattgtcagtgccgaatacctggccgacatg
caacggaaaatccagcaggtgacggaagacctcccggttgaggtcctgctggttcgccgt
agccgcgagcagcgggaacgcatactggccggtgaattgcgtgagaccctcaatgaatta
aaagtcgaagaggtatttgcccgtcgcctcgcacaggaggaactcgacgagacgcagcag
gggcgattacaggcgctgttcagcgaaacattgcaggcgctggacgaggagaaagaagca
tga
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