Kosakonia oryzendophytica: O9K67_20080
Help
Entry
O9K67_20080 CDS
T08786
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo03030
DNA replication
koo03430
Mismatch repair
koo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O9K67_20080 (dnaQ)
03430 Mismatch repair
O9K67_20080 (dnaQ)
03440 Homologous recombination
O9K67_20080 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koo03032
]
O9K67_20080 (dnaQ)
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_20080 (dnaQ)
Enzymes [BR:
koo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O9K67_20080 (dnaQ)
DNA replication proteins [BR:
koo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O9K67_20080 (dnaQ)
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O9K67_20080 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
WBT57413
LinkDB
All DBs
Position
complement(4152742..4153473)
Genome browser
AA seq
243 aa
AA seq
DB search
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHIYLKPDRLVDP
EAFGVHGIADEFLLDKPTFGDIADEFIDYIRGAELVIHNASFDIGFMDYEFSKLNRGIPK
TETFCKVTDSLALARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDSQILADVYLMMTG
GQTSMKFSMEGEGQSQTGEIGIQRVVRQASKLRVVLASDEEVMAHESRLDLVQKKGGSCL
WRS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgcaattacacgacagatcgtcctcgataccgaaaccaccggtatgaaccag
atcggcgcccactatgaagggcacaagattattgaaatcggcgcggtagaggtcgtgaac
cgccgcctgaccgggaacaacttccatatctacctcaagcctgatcggctggtggatccg
gaagcgttcggtgttcacggcatcgccgacgaattcctgctggataagcccacttttggc
gatatcgccgatgaatttattgattatatccgcggcgcggaactggtgatccataatgca
tcgtttgatatcggctttatggactacgagttcagtaagctgaatcgcggcattccgaaa
acggaaacgttctgtaaggtaaccgatagcctggcgctggcgcgtaagatgttccctggc
aagcgcaacagccttgatgcgctctgtgcgcgttacgaaatcgacaacagcaaacgtacg
ctgcacggggcgttactcgactcccaaatccttgctgatgtttatttgatgatgaccggc
ggccagacatcgatgaagttctcgatggaaggcgaagggcagtcgcagaccggggaaatt
gggatccagcgtgttgtacgtcaggcaagcaagctgcgggttgttttagccagtgatgag
gaggtgatggcccatgaatcccgcctcgatttggtacagaaaaaaggtggaagctgcctg
tggcggagctga
DBGET
integrated database retrieval system
