Kosakonia oryzendophytica: O9K67_20245
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Entry
O9K67_20245 CDS
T08786
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00310
Lysine degradation
koo01100
Metabolic pathways
koo01110
Biosynthesis of secondary metabolites
koo01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
O9K67_20245
Enzymes [BR:
koo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
O9K67_20245
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
WBT57439
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All DBs
Position
complement(4181343..4183481)
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AA seq
712 aa
AA seq
DB search
MNIIAIMGPHGAFYKDEPIKELEQALQAQGFQIIRPQNSNDLLKFIEHNPRICGVIFDWD
EYSLDLCSEINQLNEYLPLYAFINTHSTMDVSAQDMRMALWFFEYALSAADDIATRIGQY
TQEYLENITPPFTRALFTYVNEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPGRNALGILGGIPRREFTHASIEQKVANTRGAHWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTNFHPIYAGKSGMSGERMPGKVFF
ETQSTHKMLAAFSQASLIHIKGDYDEETFNEAFMMHTTTSPSYPLVASIETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLKEEAEGWFFDIWQPEEIDEADCWPVAPGESWHGFREAD
ADHMFLDPVKVTILTPGMDERGNMSDEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLMEFKRAYDLNLRVKNMLPDLYAEDPDFYRTMRIQDLAQGIHRLIRQH
DLPRLMLQAFDVLPEMKMTPHEAWQRQVQGEVETIELEKLSGRISANMILPYPPGVPLVM
PGEMITEASRPVLDFLLMLCAIGRHYPGFETDIHGAKRDEEGVYRVRVLKVH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaatattattgccatcatgggaccgcatggcgcgttctacaaagatgaacccattaag
gaactggagcaggcgttacaggcgcaagggtttcagattatccggccgcaaaatagcaac
gacttactgaagtttattgaacacaacccgcgcatctgcggggtgatctttgactgggat
gagtattccctcgatttgtgcagtgaaatcaatcaacttaatgagtacctgccgctttac
gcttttatcaacacacactcgaccatggatgtcagcgcacaggatatgcgtatggcgttg
tggttttttgagtacgcgctaagcgccgccgacgatattgcgacgcgtatcggccagtac
acgcaagagtacctggaaaacattacgccaccgtttacccgggcgctgttcacctatgtt
aatgagggtaaatacaccttctgcacgccggggcatatggcgggtactgcataccagaaa
agcccggttggatgcctgttttacgacttttttggtggcaacacgctgaaagcggacgtg
tcgatctcggtgacggaactgggatcgttgttggatcacaccgggccgcatctcgaagcg
gaagagtacattgcccgcacgttcggcgcagagcagagctacatggtgaccaacggcacc
tcgacgtcgaataaaattgtggggatgtatgcggcgcccgccggtagcaccttgcttatc
gatcgtaactgccataaatcgctggcccatctactgatgatgagcgatgtcgtgccactt
tggctgaaaccgggtcgtaacgcgctggggatcctcggtgggatcccgcgccgtgagttc
acccatgccagtattgagcaaaaggtggcgaatactcgcggagcccactggccagtgcat
gcggtgatcaccaactctacgtatgatgggctgctgtataacaccaattggatcaaacag
acgctggacgttccatcgatccactttgactccgcctgggtgccgtacaccaattttcac
ccgatctatgcaggcaaaagcggtatgagcggtgaacggatgccgggcaaggtctttttt
gaaacccagtcgacgcacaaaatgctggcggccttctcacaggcatcgctgatccacatt
aaaggcgactatgacgaagagacgttcaacgaagcgtttatgatgcataccaccacctcg
ccgagctatccattggtggcctcaattgagacggctgctgcgatgctgcgcggtaaccct
ggcaaacgactgattaaccgttcggtggaacgtgcactgcacttccgcaaagaagtgcag
cgtttgaaagaggaagcagagggttggtttttcgatatctggcaacccgaagagattgat
gaagctgactgctggccggttgcgccgggagagagctggcacggttttcgggaagctgat
gccgatcatatgttccttgatccggtgaaggtcactattttaacgccggggatggatgag
cggggaaacatgagtgacgaggggatcccggctgcgctggtggcaaaatttctcgacgag
cgcggtgtggtggtcgaaaaaacaggtccatataacctactgtttctgttcagcattggt
attgataaaacccgcgctatgggtttgttacgcggcttgatggaatttaagcgcgcctac
gatctgaacctgcgagtgaaaaatatgctgccggatctctatgccgaagatccggatttc
taccgcacgatgcggattcaggatctggcgcaggggatccatcggcttatccgccagcac
gatctgcctcgattgatgttgcaggcgttcgacgtgctgccggaaatgaaaatgacaccg
catgaggcctggcagcggcaggtccagggcgaagttgaaaccatcgagctagagaaactg
agtggccgcatctccgccaatatgatcctgccatatccgcctggtgtcccgctggtgatg
cccggcgagatgattacggaagcaagccggccagtgctcgattttttactgatgttgtgt
gcgatcggccgccactatcccggatttgaaaccgacattcatggcgcgaagcgtgatgag
gagggggtataccgggtacgagtcctaaaagtccactga
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