Kosakonia oryzendophytica: O9K67_20540
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Entry
O9K67_20540 CDS
T08786
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00010
Glycolysis / Gluconeogenesis
koo00020
Citrate cycle (TCA cycle)
koo00260
Glycine, serine and threonine metabolism
koo00280
Valine, leucine and isoleucine degradation
koo00310
Lysine degradation
koo00380
Tryptophan metabolism
koo00620
Pyruvate metabolism
koo00630
Glyoxylate and dicarboxylate metabolism
koo00640
Propanoate metabolism
koo00670
One carbon pool by folate
koo00785
Lipoic acid metabolism
koo01100
Metabolic pathways
koo01110
Biosynthesis of secondary metabolites
koo01120
Microbial metabolism in diverse environments
koo01200
Carbon metabolism
koo01210
2-Oxocarboxylic acid metabolism
koo01240
Biosynthesis of cofactors
Module
koo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
koo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
koo_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
koo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
O9K67_20540 (lpdA)
00020 Citrate cycle (TCA cycle)
O9K67_20540 (lpdA)
00620 Pyruvate metabolism
O9K67_20540 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
O9K67_20540 (lpdA)
00640 Propanoate metabolism
O9K67_20540 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
O9K67_20540 (lpdA)
00280 Valine, leucine and isoleucine degradation
O9K67_20540 (lpdA)
00310 Lysine degradation
O9K67_20540 (lpdA)
00380 Tryptophan metabolism
O9K67_20540 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
O9K67_20540 (lpdA)
00670 One carbon pool by folate
O9K67_20540 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
koo04147
]
O9K67_20540 (lpdA)
Enzymes [BR:
koo01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
O9K67_20540 (lpdA)
Exosome [BR:
koo04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
O9K67_20540 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
Thi4
NAD_binding_8
FAD_binding_3
AlaDh_PNT_C
DAO
Motif
Other DBs
NCBI-ProteinID:
WBT60695
LinkDB
All DBs
Position
complement(4252961..4254385)
Genome browser
AA seq
474 aa
AA seq
DB search
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVITQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALELKSVPKRMLV
MGGGIIGLEMGTVYHALGSEIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTA
VEAKEDGIYVSMEGKKAPSEAQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaaatcaaaactcaggtcgtggtacttggggcaggcccggcaggttactct
gctgccttccgttgcgctgatttaggtctggaaaccgtcatcgttgaacgttacagcacc
cttggcggtgtgtgtctgaacgtgggttgtatcccttctaaagcgctgctgcacgtagca
aaagttatcgaagaagccaaagcgctggctgaacacggcatcgtttttggcgagccgaaa
accgatatcgacaaaattcgtacctggaaagagaaagttatcactcagctgaccggcggt
ctggcggggatggcgaaaggccgtaaagttaaagtggttaacggtctgggtaaattcacc
ggggcgaacaccctggaagttgaaggcgaaaacggtaaaaccgtgatcaactttgacaat
gcaatcatcgcggcgggctcccgtccgattcaactgccgtttatcccgcatgaagatcca
cgcgtatgggactccactgacgcactggaactgaaatccgtaccgaagcgtatgctggtt
atgggtggcggtatcatcggtctggaaatgggtaccgtgtaccatgcgctgggttcagag
attgacgtggttgaaatgttcgaccaggttatcccggctgctgacaaagatatcgttaaa
gtcttcaccaaacgcatcagcaagaaatttaacctgatgctggaaaccaaagtgaccgcc
gttgaagcgaaagaagacggtatctatgtttccatggaaggcaaaaaggccccgtctgaa
gcgcagcgttacgatgccgtgctggtggccatcggccgtgtgccgaacggtaaaaacctc
gacgcaggtaaagccggtgtggaagtggacgaccgtggctttatccgtgttgataaacaa
ttgcgtaccaacgtgccgcacatctttgctatcggcgatatcgtcggtcagccaatgttg
gcgcacaaaggcgtgcacgaaggccacgtggccgccgaagttatcgccggtaagaaacat
tacttcgatccgaaagttatcccgtctatcgcctacaccgagccggaagtggcatgggtg
ggtctgaccgagaaagaagcgaaagagaaaggcatcagctacgaaactgccaccttcccg
tgggcagcgtctggtcgtgctatcgcttctgattgcgcagacggtatgaccaaactgatt
ttcgacaaagagacgcaccgtgttatcggtggcgcgattgtcggtaccaacggcggtgag
ctgctgggcgaaatcggactggcgatcgaaatgggttgcgacgctgaagatatcgcgctg
accatccatgctcacccgaccctgcacgaatccgtgggtctggcggcagaagtgttcgaa
ggcagcatcactgacctgccgaacccgaaagcgaagaaaaaataa
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