Kosakonia oryzendophytica: O9K67_20945
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Entry
O9K67_20945 CDS
T08786
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
koo03000
]
O9K67_20945 (nhaR)
Transcription factors [BR:
koo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
O9K67_20945 (nhaR)
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
DUF6061
Motif
Other DBs
NCBI-ProteinID:
WBT57574
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Position
complement(4351073..4351972)
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AA seq
299 aa
AA seq
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MSYINYNHLYYFWHVYREGSVVGAAEALWLTPQTITGQIKALEERLQGKLFKRKGRGLEP
TELGELVFRYADKMFTLSQEMLDTINYRKESNLLFDVGVADALSKRLVSGVLDAAVQDGE
QIHLRCFESTHELLLEQLSQHKLDMIISDCPIDSTQQEGLFSVKIGECSVSFWCCNPPPQ
KPFPFCLEERRLLIPGRRSMLGRKLLNWFNVQGLQVEILGEFDDAALMKAFGAAHNAIFV
APSLYIHDFYADERMVEIGRVDNVMEEYHAIFAERMIQHPAVQRICNRDYSGLFSPLRK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatattaattacaatcatttgtattatttctggcatgtttatcgtgaaggctcc
gtcgttggcgcggcggaggcactctggctgacgccgcaaactatcaccgggcagatcaaa
gcgctggaagagcggttgcaaggcaaactctttaaacgtaaggggcgtgggctggagccg
acagaactgggtgaattggtgtttcgctatgcggataaaatgttcaccctgagtcaggaa
atgctggataccattaattaccgtaaagagtccaatttgctctttgatgtgggggtcgcc
gatgcgctctctaaacggctggtgagtggggtgctggacgctgccgtacaggacggggaa
caaattcatctgcgctgttttgagtctacccacgagctgctgcttgagcaattaagccag
cataaactggatatgatcatctctgattgcccaatcgattccacgcaacaagaggggctc
ttttccgtgaagattggtgaatgcagcgtcagtttttggtgttgtaatccgccgccgcaa
aaaccattcccgttttgcctggaagaacgtcgtttattgatacctggccgacgctcaatg
ctcggacgcaagttgttgaactggtttaacgtccaggggttacaggtggaaatcctcggg
gagtttgacgatgccgcgttaatgaaggcgttcggtgcagcgcataacgcaatttttgtc
gcaccatcgctgtatattcacgacttttatgcggacgagcgcatggtagagatagggcgg
gtggataatgtgatggaggagtatcacgccattttcgcggaacggatgatccagcatccg
gcggtgcagcgcatttgtaatcgagattactcagggctcttctcaccgttacggaaataa
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