Kosakonia oryzendophytica: O9K67_21090
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Entry
O9K67_21090 CDS
T08786
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koo03400
]
O9K67_21090 (radA)
DNA repair and recombination proteins [BR:
koo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
O9K67_21090 (radA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
RecA_N
GvpD_P-loop
Rad51
AAA_22
SLFN-g3_helicase
AAA_14
nSTAND_NTPase5
ABC_tran
AAA_16
NTPase_1
AAA
nSTAND3
AAA_24
cobW
Zeta_toxin
DZR
Viral_helicase1
AAA_29
Herpes_Helicase
PAXNEB
AAA_5
Motif
Other DBs
NCBI-ProteinID:
WBT57601
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All DBs
Position
complement(4382563..4383945)
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AA seq
460 aa
AA seq
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MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEIRVAASPTVARNERLAGYAGSAGV
SKVQKLADISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
EQMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICMIAEEEQPKLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
KHGFRRAIVPAANVPKKMPEGMQIFGVKKLADALSVFDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagctccgaaacgcgcgtttgtctgtaatgaatgcggtgcagattacccgcgc
tggcaggggcagtgcagtgcctgtcatgcctggaacaccattacggaaatacgtgttgct
gcgtcgcccaccgtggcgcgcaatgagcgtctcgctggctatgccggcagtgcgggcgta
tcgaaagtgcaaaaacttgccgatatcagccttgaagagctgccgcgcttctctaccggt
tttaaagagtttgaccgtgtgctcggcggtggcgttgtgcccggcagcgctatcctgatt
ggcggaaaccctggcgcgggcaagtccacgctgctgttgcagacgttgtgcaaactcgcc
gaacagatgaaaacgctgtatgtcacgggtgaagagtcactgcaacaggtggcgatgcgt
gctcaccgacttggattaccgacggccaacctgaatatgttgtcggaaaccagtatcgag
caaatctgcatgatcgcagaggaagagcagccgaaactgatggtgatcgactccattcag
gtcatgcatatggcggatatccagtcatcgccgggcagtgtcgcgcaggtgcgtgaaaca
gcggcttacctgacgcggttcgctaaaacacgcggcgtggcgattgtgatggtcggccat
gtgacgaaagacggttccctggcgggaccgaaagtgctggagcactgcatcgactgttcg
gtactgcttgacggtgatgcggattcccgtttccgtacgctgcgtagccacaaaaaccgt
tttggcgcggttaatgaactgggtgtgttcgccatgaccgagcaggggttgcgcgaagtg
agcaatccctcggccattttcctcagtcgtggcgatgaggtgacttccggcagctctgtg
atggtggtgtgggaaggtacccgtccgctattggtagagattcaggcgctggtggatcac
tcaatgatgtcaaatccccggcgggttgcagtaggtctggaacaaaaccgtctggcgatc
ctgctggcggtgctgcatcgtcacggtgggttgcagatggcggatcaggacgtgtttgtg
aacgttgttggtggggtgaaggtcaccgaaaccagtgctgaccttgcactattgctggcg
atggtttccagtctgcgcgacagaccgctgccgcaggatttggtggtgtttggcgaagtg
gggctggccggtgagatccgcccggtgccaagcggccaggagcgtatttcggaagccgcc
aagcatggtttccgccgcgccatcgttccggcggcgaatgtgccgaaaaaaatgccggaa
gggatgcagattttcggtgtgaagaagctggcggatgcgttaagcgtctttgacgactta
taa
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