Kosakonia oryzendophytica: O9K67_22090
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Entry
O9K67_22090 CDS
T08786
Symbol
tamB
Name
(GenBank) autotransporter assembly complex protein TamB
KO
K09800
translocation and assembly module TamB
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
koo02000
]
O9K67_22090 (tamB)
Transporters [BR:
koo02000
]
Other transporters
Pores ion channels [TC:
1
]
O9K67_22090 (tamB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
WBT57785
LinkDB
All DBs
Position
complement(4580096..4583872)
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AA seq
1258 aa
AA seq
DB search
MSLWKKISLGVLMFILLVLGTVAFLVGTTSGLHLLFKAANRWVPGLHISQVTGGWRDLTL
KNLRYEQPGVAVNAGEIHLAVNLGCLRSSSLCINDLSLKEINVAIDSKKMPPAAPVQEEE
SGPLNLSTPYPITLSRVALNNVNINIDDTTVSVMNFSSGLSWEEKNLTLKPTSLQGLLIA
LPKVAQVAQEEVVEPKIHNPQPQEKPLGETLKALFAKPLLPEMTDVHLPLNLNIESFRGE
QLRLTGDTDILVRSLLLKVSSLDGQMTLDALDIDSNQGQVSATGRAQLRDNWPVDFTLNS
TLNVDPLKGEKVKLHVGGDVRQQLNMDVNLSGPVDVTLRAQTQLAQAGLPLEVAVTSKQL
YWPFTGEKQYQADDVSLTLTGKMTDYTLAFRTAVKGQDLPPATIRLDAKGNEQQISLDKL
TLAALEGTTELTALLDWQQAISWRGELALNGIDTAKAFPAWPSKLNGLIKTRGSLYGGSW
QLDVPELKLNGNVKNNKVKVDGQLKGNSYLQWTIPGLHLELGRNSADIKGELGVKDLNLD
ANIDAPGLDNALPGLGGTAKGVVKIRGTVDAPQALADITANNLRWQDLSVARVRVDGDVK
SSDHIAGKLTVRVERIAQPGVNLGLVTLAAEGSEKQHTLQLRVQGEPVSGQLDLAGSFDR
QAQRWKGSLSNTRFATPVGPWSINRPITLDYRNQEQKIAIGQHCWLNPNAELCVPQPIDA
GAEGHALVNLNRFDLAMLKPFMPETTQASGVFSGKADVSWDTTKAGLPQGQVTLVGRNVK
VTQVVNDAPLPVAFDTLNLNAQLRNDRADLGWLIRLTNNGQFDGQVQVTDPQGRRNLGGN
VNIRNVSLAMANAIFSRGEKAAGTLNANLRLGGNAQNPQLFGQLGLNGLDVEGNFMPFEM
QPSQLAINFNGTRSVLQGVVRTGQGQINLSGDADWTQMNNWRARVAAKGSKVRITVPPMV
RLDVSPDVVFEATPSLFTLNGSVDVPWARIVVHDVPESAVGVSGDEVMLNDQLKPEKPQS
ASIPINSNLVIHVGNNVRLNAFGLKARLTGDLKVAQDKQGLGLNGQITIPEGRFHAYGQD
LIVRKGELLFSGPPDQPLLNIEAIRNPDATENDVIAGVRVTGTADEPKAEIFSDPAMSQQ
EALSYLLRGQGLDSEQSDSAAMTSMLVGLGVAQSGQVVGKIGETFGVSNLALDTQGVGDA
SQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatggaagaaaatcagcctcggcgtactgatgtttattctgctggtgctgggg
acggtcgcctttctggtgggaaccaccagcgggcttcatctgctgtttaaggcggcgaac
cgctgggtgccggggctgcacattagtcaggtcacgggcggctggcgcgatctgacgctg
aaaaatctgcgttacgagcagcccggtgtagcggtgaacgccggggagatccacctggca
gtgaatctggggtgtctgcgtagcagtagcttgtgcatcaacgatctgtcgttgaaagag
atcaacgtggcgatcgacagtaaaaagatgccgccagccgctcctgtgcaggaagaggag
agcgggccgctgaacctctctacgccgtacccgattacgctcagccgggtggcgctgaac
aatgtaaatatcaacattgacgatacgaccgtctcggtgatgaatttcagttccgggctg
agctgggaagagaaaaacctgacgctgaagcccacctcattgcaagggctgctgattgcg
ctgccgaaagtggcgcaggtggcgcaggaagaggtggttgaaccgaaaatccacaatccg
cagcctcaggagaagccgctcggcgaaacgctgaaagcgctgtttgccaaacccctgtta
ccggaaatgaccgatgtgcatttgccgctcaatctcaatattgagtcgtttcgcggcgag
caactgcgactcactggcgacacggatattctggtgcgtagcctgctgctgaaagtgagc
agccttgacgggcaaatgacacttgatgcgctggatatcgactcgaaccaggggcaggtg
agcgcgacaggccgcgcacagttgcgtgataactggccggtggattttacgcttaacagc
acgttgaatgtggatccgctaaaaggcgaaaaagtgaagctgcacgttggcggtgacgtg
cgccaacaactcaatatggatgtgaacctctccggtccggtggacgtgacgctgcgggcg
caaacgcaactggcgcaggccggtttgccgctggaggttgcggtgaccagtaagcaactc
tactggccgtttaccggcgagaaacagtatcaggcagatgacgtctcgctgacgctgacc
ggcaagatgaccgactacacgctggcgttccgtaccgcggtgaaagggcaggatctgcca
cccgccaccatccggcttgatgcaaaaggcaatgagcagcaaatcagcctcgataagctg
accctcgcggcgttggaaggaaccactgagttaacggcgctgctggactggcagcaggcg
atcagctggcgtggcgaactggcgttgaacgggattgatacggcaaaagcttttccggca
tggccgtcaaaactgaatggcctgatcaaaacgcgcggtagcctgtacggcggtagctgg
cagttggatgtaccggagctgaagctgaacggtaatgtgaaaaacaacaaggtgaaggtc
gacgggcaactgaaaggcaatagctatttacagtggaccattcccggtttgcatctggag
ttggggcgcaacagtgcggatatcaaaggcgaactgggggtaaaagatctcaatcttgac
gccaatattgatgcgccaggcctggataacgcactgccaggacttggggggacggccaaa
ggcgtcgtgaaaattcgcggcacggtcgatgcgccgcaagcgctggcggacatcacggcc
aataatctgcgctggcaggatctttccgttgctcgcgtgcgggtcgacggggatgtgaaa
tccagcgatcacatcgccgggaagctcactgtgcgcgtggagcgtattgcacagccgggt
gtcaacctgggcctggtaacgctggcggctgaagggagcgaaaaacaacacaccttacag
ttgcgtgtacagggggagccggtttccgggcaactggatctggcggggagtttcgatcgc
caggcgcagcgctggaaaggctcgctcagtaatacgcgctttgccaccccggtagggcca
tggtcgatcaaccggccgattaccctggattaccggaaccaggagcagaaaattgccata
ggccagcactgctggcttaaccccaacgccgagctttgcgtgccgcaaccgattgatgcc
ggcgcggaagggcacgcgctggtgaaccttaatcgttttgacctggccatgctgaagcct
tttatgccggagaccacccaggcgagcggtgtgttcagtggcaaagcggatgtgagctgg
gacacgacaaaagccgggctgccgcaggggcaggttacgcttgtcgggcgtaacgtgaaa
gtgacgcaggtggtgaacgatgcgccgttgccagtagcgtttgataccctgaacctgaac
gcccaactgcgtaacgaccgcgccgatctcggctggctgattcggctgaccaacaacggg
cagtttgatggtcaggtgcaggtaaccgatccgcaagggcgacgtaatctgggcggcaac
gttaatatccgcaacgtctcgctggcgatggccaatgccatcttcagccggggtgaaaag
gcggcgggtacgctgaacgccaatttgcgactgggcggaaacgcgcagaacccgcagttg
ttcgggcaactgggattgaacggactggatgtcgaaggcaactttatgccgttcgagatg
cagcccagtcagttggcgatcaatttcaacggtacacgctccgtgcttcagggcgtggtg
cgcaccggccaggggcagattaacctcagcggcgatgcagactggacccagatgaacaac
tggcgcgcgcgggtggcggcgaagggcagtaaagtgcgcattaccgtaccgccaatggtg
cggctggatgtgtcgccggatgtggtgtttgaagccacacccagtctgtttacgcttaac
ggcagtgtggatgtgccgtgggcacgcatcgtggtgcatgacgtgccggaaagcgcggtc
ggcgtctctggtgatgaggtaatgcttaacgatcaactgaaacctgagaaaccgcaaagc
gcctcgatcccgattaacagtaatctggttatccacgttggcaacaatgtgcgtctgaat
gcgtttggcctcaaagcacggctgaccggcgacctgaaagtggcgcaggataagcaaggg
ttggggcttaacgggcagatcacgatcccggaagggcgtttccacgcttatggtcaggat
ttgattgtgcgtaaaggggaactgctgttctccggtccgccggaccagcccttgctgaat
attgaggcgatccgtaacccggatgcgacggaaaatgatgttattgccggggttcgtgtg
accgggacagccgatgaacccaaagcggagatcttctccgatccggcgatgtcgcagcaa
gaagcgctctcctacctgcttcgtgggcagggtctggacagtgaacagagcgatagcgcc
gcaatgacctcaatgcttgtaggcctgggggttgcacaaagtgggcaggttgtgggtaaa
atcggcgagacgtttggcgtaagcaatctggcgctggatactcagggggtaggcgatgcc
tcccaggtagtggtcagtggctacgtgctgccgggtctgcaggtaaaatatggcgtcgga
atttttgactcactggcgactctcacgttacgttatcgcctgatgcctaagctgtatctt
gaagcggtgtctggcgtagatcaggcacttgatttgctctatcagtttgagttttag
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