Kosakonia oryzendophytica: O9K67_23260
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Entry
O9K67_23260 CDS
T08786
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00730
Thiamine metabolism
koo01100
Metabolic pathways
koo01240
Biosynthesis of cofactors
Module
koo_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
O9K67_23260 (thiC)
Enzymes [BR:
koo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
O9K67_23260 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WBT57994
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Position
4833095..4834987
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AA seq
630 aa
AA seq
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MSAKLTRREQRAQAQHFIDTLEGTAFPNSHRIYVTGSRPDIRIPMREIQLSPTLTGGTKE
HPQFEENEAVPVYDTSGPYGDPAIAIDVQQGLAKLRAPWIAARDDSETLDERSSAYTNAR
LADEGLDELRFNGLLTPRRAKAGQRVTQLHYARKGIITPEMEFIAIRENMGRERIRSEVL
RRQHPGEAFGARLPKNITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANIG
NSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALE
KVNGIAEDLNWQAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAQRLTGIVSRGGSIMAK
WCLSHHQENFLYTHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTK
IAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGIG
AAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMS
KARFEFRWEDQFNLALDPFTARAYHDETLPQESGKIAHFCSMCGPKFCSMKISQEVRDYA
AAQAIEVGMHDKSNDFRARGGEIYLKKEEA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaacttacacgccgtgaacaacgcgcccaggcgcaacactttatcgacacg
ctggaaggcaccgctttccccaattcacaccgtatttacgtcaccggttcacgacctgat
atccgtatcccaatgcgggaaatccagctcagcccaacgctgactggcggtacaaaagag
caccctcagtttgaagagaacgaagcagtaccggtttacgacacctccggcccgtatggc
gatccggcaatcgccatcgatgtgcagcaaggtctcgcgaagttacgcgccccctggatc
gccgcgcgtgatgacagtgaaacgcttgatgaacgcagttcagcttataccaatgcacgt
ctggcggacgaaggccttgatgagctgcgcttcaacgggctattgaccccgcgccgcgcc
aaagctggtcaacgtgttacccagctacactacgcccgcaaagggatcatcacgccggag
atggagtttatcgccattcgcgaaaatatgggccgcgaacgtattcgtagcgaagtgctg
cgcagacagcatccgggtgaagcttttggcgcccgcctgccgaaaaatatcacgccagag
tttgtgcgcgatgaagtcgccgctggccgcgcgatcattccagccaacatcaaccacccg
gagtcggaaccgatgatcattgggcgtaactttctggtaaaagtgaacgccaacatcggt
aactcagccgtgacctcgtccatcgaagaggaagtagaaaaactggtgtggtcaacccgc
tggggcgcagacacggtgatggatctctctaccgggcgctatattcacgaaacccgcgaa
tggatcctgcgtaacagcccggtgccaatcggtacggtaccgatctaccaggcgctggag
aaggtgaacgggatcgccgaagatctaaactggcaggcattccgcgatacgctgctcgaa
caggcggaacaaggggtggattatttcactatccacgcaggcgtattgctgcgttacgtc
ccgatgaccgcgcagcgcctgaccggcattgtttcgcgtggcgggtcgattatggcgaag
tggtgcctctcccatcatcaagaaaacttcctttacactcacttccgggaaatttgtgaa
atctgcgccgcatacgatgtttcgctgtctctcggcgatggcctgcgtccgggttcgatc
caggatgccaacgacgaagcgcagtttgccgaactgcatacgctgggtgaactgaccaaa
atcgcctgggagtatgatgtgcaggtcatgattgaaggtccggggcatgtgccgatgcag
atgatccgccgcaatatgaccgaagaactggagcattgtcacgaagcgccattctacacg
ctcggaccactgaccaccgatatcgcgccaggttatgaccacttcacctccggtattggc
gcggcaatgattggctggtttggctgtgccatgctctgttatgtcacacccaaagaacac
ctgggcctgccaaacaaagaggatgttaaacaggggttgatcacctacaagatcgccgcc
catgctgctgacctggcaaaaggccaccctggcgcgcagatccgcgataacgccatgtcg
aaagcccgttttgagttccgctgggaagatcagtttaatcttgcgctggatccctttacc
gcccgtgcttaccatgatgaaaccctaccgcaggagtccggcaaaatcgctcacttctgc
tcaatgtgcgggccgaaattctgctcgatgaaaatctcgcaggaagtgcgcgattacgcg
gcggcgcaggccatcgaagtcgggatgcatgataagtcgaacgacttccgcgcccgcggc
ggggaaatctacctgaaaaaggaggaagcctga
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