Kosakonia oryzendophytica: O9K67_24495
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Entry
O9K67_24495 CDS
T08786
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00040
Pentose and glucuronate interconversions
koo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
O9K67_24495
Enzymes [BR:
koo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
O9K67_24495
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Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
WBT58207
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Position
complement(5094995..5097115)
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AA seq
706 aa
AA seq
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MNYKIPLAITVCSSLISASVLATPAPVWRAIAFGQSTDVNFSSNVLPEKIGVNDVTIDGK
TLSVSDQADLSKPITLESRGGKIANSHDGLTYFYTSLPTGENFVLQATVTVDQFGPENGA
KPAAQEGAGLLVRDIIGNPRQQPLKEGYEEFPAASNMVMNAIMTQDKKDHFRVKIQAIAR
EGISHPWGDAGAAITKKSYQEEVDLRQTPTFRMKLERTNDGFISAWAPQGSDNWVSQTIP
HADLISVQNSEQYYVGFFASRNAKITISDASLTTSKARTVASKPWQAKPLPVVVQIASPA
QSISEKYTVQARANYDGLFAVRQNEVVIGNDKPVKAGDMYTLPATLSGDTSMFVLTFTPT
SGDDKTPVTQTINVERATATTATTLHVAADGKTDGEGTAASPLDLATAINLLPPGGTLAL
KAGDYARTEIPLTASGLLGKMKTLQADGKVVIHGLQLDASYWHIKGIEVTDKSLRVQGSH
NLIEKVVAWRNDDTGIQISSPENIGRPLWASHNRVIDSESWSNEDPGKINADGFAVKMRV
GEGNKLERCYAHDNIDDGFDLFNKIEDGGNGVVVIENSIASNNTSNGFKLGGEGQPVAHQ
VRNSKAIGNHLDGFTDNFNPGKLVVENNIAADNQRFNFIFRPSPYGDASTQGVFKGNISV
RSKAGQYDDAVVGNIDATNYFIANGKSVNALQQEVDSKAVLAELKM
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaattataaaatacctctcgccataaccgtttgcagctcacttatctccgcttctgta
ctggccacaccggctcctgtatggcgagccattgctttcgggcaatcaactgacgtgaat
ttttcttctaacgttctgccggaaaagatcggcgttaacgatgtaactatcgacggcaag
acactttccgtttcggaccaggccgatctctctaaacccatcacactcgaaagccgcggc
ggtaaaattgctaactctcatgatggcctgacctacttttacacatccctgcccactggc
gaaaattttgtcttacaggccaccgtcaccgtagaccagttcggtccggaaaatggcgcc
aaaccggcggcgcaagaaggggctggcttactggttcgcgatattattggcaacccgcgc
cagcagccgctgaaagagggctatgaggagttcccggcggcatcgaatatggtgatgaat
gccatcatgacgcaggataaaaaagaccattttcgcgtgaaaatacaggcaatcgcccgt
gaagggatcagccacccgtggggagacgctggcgcggcaatcactaaaaaaagttaccag
gaagaggtggatcttcgccagacgcccaccttccgcatgaaactcgagcgtaccaatgac
ggttttattagcgcatgggctccgcaaggaagcgataactgggtaagccagacaattcca
catgccgatttgatttcagtacagaacagcgagcaatattacgtcggtttctttgcctca
cgtaatgccaaaattaccatctccgacgcctctctgaccaccagcaaagcccgaacggtg
gcatccaaaccctggcaggcaaaaccgttgcctgttgttgtgcagatagcctcgcctgcg
caaagtatcagtgagaaatataccgttcaggcacgcgccaactatgatggtctgtttgct
gtgcggcaaaacgaagtggtgatcggtaatgataaacccgtaaaagcgggtgatatgtac
acgctccccgcgacgctttcaggtgacacctccatgtttgtgttgaccttcacccccacc
agcggcgatgacaaaacccccgttacgcagaccataaacgtagagagagcgaccgccaca
accgccacaaccctccatgtcgccgccgacggaaaaacggatggcgaaggtacggccgcc
tcaccgctggatttagccaccgccatcaatctgctgccgccaggtggcacccttgcgcta
aaagccggagactatgcgcgaacagaaatcccgctcacagccagcggtttgctggggaag
atgaagacgctgcaagccgacggcaaagtggtgattcatgggttacaactagacgccagc
tactggcatatcaaggggattgaagtcacagacaagagcctgcgtgtgcaaggcagtcac
aacctgatcgaaaaagtggtcgcctggcgtaatgacgataccggtattcaaatttcttcg
ccggaaaatatcggtcgaccattatgggcgagccacaaccgcgtgatcgattccgagtcc
tggagtaatgaagatccggggaaaattaatgccgacgggtttgccgtaaaaatgcgcgta
ggcgaagggaacaaactggaaagatgctatgcccacgacaacattgacgatggttttgat
cttttcaacaagattgaagatggcggcaacggtgttgtggtgatcgagaattcaattgcc
agtaataacaccagcaatggttttaaactgggaggagaagggcagcctgtcgctcatcag
gttcgcaacagcaaagcaatcggcaaccatctggacggtttcaccgataattttaaccct
ggcaagttggtggtggaaaacaatattgccgcggataaccaacgctttaactttatcttc
cgccccagtccttacggtgatgcctccacgcaaggcgtgtttaaaggcaacatttctgta
cgcagtaaagccgggcagtatgatgatgcggtggtggggaatattgacgcgacgaactac
tttatcgccaatggcaaaagcgtgaatgcattgcagcaagaagtggacagtaaagcggta
ctggcggaactgaagatgtag
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