Kosakonia oryzae: AWR26_02380
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Entry
AWR26_02380 CDS
T04433
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
kor
Kosakonia oryzae
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kor03019
]
AWR26_02380 (csrD)
Messenger RNA biogenesis [BR:
kor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AWR26_02380 (csrD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
ERMP1-TM
GDPD
Motif
Other DBs
NCBI-ProteinID:
ANI81046
UniProt:
A0AA94KSH7
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Position
495978..497921
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AA seq
647 aa
AA seq
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MRLTTKFSAFVTLLTALAIFVTLIGSSLSFYNAIQNKVANRVAAVAAVVDTRLISTPANR
LSPQLDELMVPLDIIKVEIKQGKKTLLSYAHNGIYRPAGSSLQIRELSVPALKNPGLTIS
LIYLDPMANYFRSLVNTAPLTVAIGFMIVIIFLAVRWLRRQLSGQELLEGRATRILNGER
GPQVRGSIYEWPSRTSSALDVLLTDIQFASDQRSRMDTLIRSYAAQDTRTGLNNRLFFDN
QLATLLEDQEKVGSHGVVMMIRLPDFDLMRESWGLTTAAEEYFFTLINLLSTFIMRYPGA
LLARYHRSDFAVLLPHRTLKEAESIAGQILKSVDGLPHNKAQNREDIMHIGVCAWRSGQS
TEQVMEHAEAAARNAVLQGGNSWSVYDDSLPEQGRGNVRWRTLIEQMLSRGGPRVYQKPA
VNRDGLVHHRELMCRIFDGEQEVIAEEYMPMVLQFGLSEEYDRQQITRLIPFLGFWPEEN
LAMQVTVQSLVRPRFQRWLRDTLMECEKSQRKRIIFELAEADVCQHISRLQSVVRLINAL
GARVAVVQAGLTLVSTSWIKVLDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTRTR
VFATGVRARAEWQTLVDRGVVGGQGDFFASSLPLDTNVKKYSQRYSV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattttccgcttttgtgacgctgctgaccgcgttggcgattttc
gtcacgctgatcggttcctcactgagcttttataatgccatacaaaacaaggtggctaac
cgcgtggcggcggtcgctgcggttgtggatacccgcctgatttctacccctgccaaccgg
ctttcgcctcagcttgatgaactgatggtgccgctggatatcattaaagttgagatcaag
caggggaagaaaaccctgctcagctatgcgcacaacggcatctaccgtccggcaggcagt
agtttacagatccgtgaattgtccgttccggcgctgaaaaaccccggcctcacgatttcg
cttatctacctggatccgatggccaactactttcgttcgctggtcaatacggcgccgttg
actgtcgcgatcggttttatgattgtcattatctttcttgctgtgcgctggctgcgtcgt
cagctttccggacaggaactgctggaaggacgggcgacgcgtatccttaatggcgagcgg
ggcccgcaggttcgcggcagcatctacgagtggccatcacgcaccagcagcgcgctggat
gtgctgctgacagatatccagtttgccagcgatcagcgcagccggatggatacgctgatc
cgctcttatgcggcgcaagatacgcgtactggcctgaacaaccgtctgttttttgataat
caactggcgacactgctggaagatcaggaaaaagtcggttcgcacggggtcgtgatgatg
atccgcctgccggattttgatctcatgcgcgagagctgggggctgaccacggcggcggaa
gagtatttcttcaccctcatcaacttactttctacttttattatgcgttaccctggcgcg
ctgctcgcacgctatcatcgcagcgattttgccgtgttgttgccgcaccggacattaaag
gaagcggaaagtatcgccgggcagatcctgaaatctgtcgatgggctgccgcacaataag
gcgcagaatcgcgaagatattatgcacatcggcgtttgtgcatggcgtagcggccagtca
acggaacaagtgatggagcacgcggaagcggcggcgcgcaatgcggtattgcagggtggt
aacagttggtcggtttatgatgattccttacccgagcaagggcgtggcaatgtgcgctgg
cggacgctgatagagcagatgttgagccggggcgggccgcgcgtttatcagaaacccgcg
gtcaatcgcgatgggctggtgcatcaccgtgagctgatgtgtcgtattttcgacggtgaa
caagaagtgatcgccgaagaatatatgccgatggtgctccagtttggcctctccgaagag
tatgaccgccagcagatcacccgtcttattcccttcctgggattctggccggaagaaaat
ctggcgatgcaggtgacagttcagtctctggtacgcccgcgttttcaacgctggctgcgc
gacacattaatggaatgcgaaaaatctcaacgtaaacggattatttttgaacttgctgag
gctgatgtttgtcaacatatcagccggttacagtcggtggtgcgattaattaacgctctg
ggcgcgcgcgtagcggtagtacaggcgggtctgacgttggtgagcaccagttggattaaa
gtgttggatgtggagttattaaagctgcatccgggactggtcaggaacattgaaaagcgt
accgaaaatcagttgctggttcaaagccttgtggaggcgtgcaaaggcacgcggacacgc
gttttcgcgacaggcgttcgcgcgcgggctgaatggcagacgctggtggatcggggcgtt
gtcgggggacagggcgattttttcgcgtcttctctaccgctcgataccaatgtgaaaaaa
tattcgcaaagatattcggtttga
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