KEGG   Kosakonia oryzae: AWR26_02380
Entry
AWR26_02380       CDS       T04433                                 
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
kor  Kosakonia oryzae
Brite
KEGG Orthology (KO) [BR:kor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kor03019]
    AWR26_02380 (csrD)
Messenger RNA biogenesis [BR:kor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     AWR26_02380 (csrD)
SSDB
Motif
Pfam: EAL GGDEF GAPES4 ERMP1-TM GDPD
Other DBs
NCBI-ProteinID: ANI81046
UniProt: A0AA94KSH7
LinkDB
Position
495978..497921
AA seq 647 aa
MRLTTKFSAFVTLLTALAIFVTLIGSSLSFYNAIQNKVANRVAAVAAVVDTRLISTPANR
LSPQLDELMVPLDIIKVEIKQGKKTLLSYAHNGIYRPAGSSLQIRELSVPALKNPGLTIS
LIYLDPMANYFRSLVNTAPLTVAIGFMIVIIFLAVRWLRRQLSGQELLEGRATRILNGER
GPQVRGSIYEWPSRTSSALDVLLTDIQFASDQRSRMDTLIRSYAAQDTRTGLNNRLFFDN
QLATLLEDQEKVGSHGVVMMIRLPDFDLMRESWGLTTAAEEYFFTLINLLSTFIMRYPGA
LLARYHRSDFAVLLPHRTLKEAESIAGQILKSVDGLPHNKAQNREDIMHIGVCAWRSGQS
TEQVMEHAEAAARNAVLQGGNSWSVYDDSLPEQGRGNVRWRTLIEQMLSRGGPRVYQKPA
VNRDGLVHHRELMCRIFDGEQEVIAEEYMPMVLQFGLSEEYDRQQITRLIPFLGFWPEEN
LAMQVTVQSLVRPRFQRWLRDTLMECEKSQRKRIIFELAEADVCQHISRLQSVVRLINAL
GARVAVVQAGLTLVSTSWIKVLDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTRTR
VFATGVRARAEWQTLVDRGVVGGQGDFFASSLPLDTNVKKYSQRYSV
NT seq 1944 nt   +upstreamnt  +downstreamnt
atgcgattaacgacgaaattttccgcttttgtgacgctgctgaccgcgttggcgattttc
gtcacgctgatcggttcctcactgagcttttataatgccatacaaaacaaggtggctaac
cgcgtggcggcggtcgctgcggttgtggatacccgcctgatttctacccctgccaaccgg
ctttcgcctcagcttgatgaactgatggtgccgctggatatcattaaagttgagatcaag
caggggaagaaaaccctgctcagctatgcgcacaacggcatctaccgtccggcaggcagt
agtttacagatccgtgaattgtccgttccggcgctgaaaaaccccggcctcacgatttcg
cttatctacctggatccgatggccaactactttcgttcgctggtcaatacggcgccgttg
actgtcgcgatcggttttatgattgtcattatctttcttgctgtgcgctggctgcgtcgt
cagctttccggacaggaactgctggaaggacgggcgacgcgtatccttaatggcgagcgg
ggcccgcaggttcgcggcagcatctacgagtggccatcacgcaccagcagcgcgctggat
gtgctgctgacagatatccagtttgccagcgatcagcgcagccggatggatacgctgatc
cgctcttatgcggcgcaagatacgcgtactggcctgaacaaccgtctgttttttgataat
caactggcgacactgctggaagatcaggaaaaagtcggttcgcacggggtcgtgatgatg
atccgcctgccggattttgatctcatgcgcgagagctgggggctgaccacggcggcggaa
gagtatttcttcaccctcatcaacttactttctacttttattatgcgttaccctggcgcg
ctgctcgcacgctatcatcgcagcgattttgccgtgttgttgccgcaccggacattaaag
gaagcggaaagtatcgccgggcagatcctgaaatctgtcgatgggctgccgcacaataag
gcgcagaatcgcgaagatattatgcacatcggcgtttgtgcatggcgtagcggccagtca
acggaacaagtgatggagcacgcggaagcggcggcgcgcaatgcggtattgcagggtggt
aacagttggtcggtttatgatgattccttacccgagcaagggcgtggcaatgtgcgctgg
cggacgctgatagagcagatgttgagccggggcgggccgcgcgtttatcagaaacccgcg
gtcaatcgcgatgggctggtgcatcaccgtgagctgatgtgtcgtattttcgacggtgaa
caagaagtgatcgccgaagaatatatgccgatggtgctccagtttggcctctccgaagag
tatgaccgccagcagatcacccgtcttattcccttcctgggattctggccggaagaaaat
ctggcgatgcaggtgacagttcagtctctggtacgcccgcgttttcaacgctggctgcgc
gacacattaatggaatgcgaaaaatctcaacgtaaacggattatttttgaacttgctgag
gctgatgtttgtcaacatatcagccggttacagtcggtggtgcgattaattaacgctctg
ggcgcgcgcgtagcggtagtacaggcgggtctgacgttggtgagcaccagttggattaaa
gtgttggatgtggagttattaaagctgcatccgggactggtcaggaacattgaaaagcgt
accgaaaatcagttgctggttcaaagccttgtggaggcgtgcaaaggcacgcggacacgc
gttttcgcgacaggcgttcgcgcgcgggctgaatggcagacgctggtggatcggggcgtt
gtcgggggacagggcgattttttcgcgtcttctctaccgctcgataccaatgtgaaaaaa
tattcgcaaagatattcggtttga

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