Kosakonia oryzae: AWR26_02760
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Entry
AWR26_02760 CDS
T04433
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kor
Kosakonia oryzae
Pathway
kor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWR26_02760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kor03019
]
AWR26_02760
03009 Ribosome biogenesis [BR:
kor03009
]
AWR26_02760
Enzymes [BR:
kor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWR26_02760
Messenger RNA biogenesis [BR:
kor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWR26_02760
Ribosome biogenesis [BR:
kor03009
]
Prokaryotic type
rRNA helicases
AWR26_02760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_C
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANI81116
UniProt:
A0AA94KSG1
LinkDB
All DBs
Position
574214..576118
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AA seq
634 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLHNIDPDLRAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSSEEEMDI
ETLAAALLKMAQGERPLILPPDAPMRPRREFRERDDRFERRGDRNDRGPRGERSERGGED
RPRRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIELP
KGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRERNERRGGGERRGGFGGERREGGRSEGR
RFSGERQEGRSFGGERRAPRRDRDESTSRRRNDA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
ctgaacgatctcggttacgaaaaaccatctccgatccaggctgagtgcattccgcacctg
ctgtctggtcgtgacgtactgggcatggcccagactggtagcggtaaaaccgcagcgttt
tctcttccgctgctccataacatcgatccggacctgcgtgcgccgcagatccttgtgctt
gctccgacccgcgaactggcggttcaggtagctgaagcaatgaccgatttttctaaacat
atgcatggcgtaaacgttgttgccctgtacggcggccagcgttatgacgtgcaattacgc
gccctgcgccaggggccgcagatcgtcgtcggtacgccggggcgtctgctggatcacctg
aaacgcggtacgctggatctctctaaactgagcggtctggttctggatgaagccgacgaa
atgctgcgcatgggctttatcgaagacgttgaaacgattatggcgcagatcccggaaggt
catcagaccgcgctgttctctgcaaccatgccggaagcgatccgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtaactactcgcccggacatc
agccagagctactggacggtgtacggcatgcgtaaaaacgaagcgctggttcgtttcctc
gaagcggaagattttgatgcggcgatcatcttcgttcgtaccaaaaacgcgacgctggaa
gtggctgaagccctggagcgcaacggttataacagcgccgcgctgaacggcgacatgaac
caggcgctgcgtgagcagactctggaacgcctgaaagatggtcgtcttgatatcctgatc
gctaccgacgttgcggcgcgtggtctggacgttgagcgtatcagcctggtcgttaactac
gacattccgatggattctgaatcctacgttcaccgtatcggccgtaccggtcgtgcgggt
cgcgctggccgtgcactgctgttcgttgagaaccgcgagcgccgtctgctgcgcaacatt
gaacgcaccatgaagctgaccattccggaagtcgagctgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gatcaataccgcgcgctgctggcaaaaatccagccttcttccgaagaagagatggacatt
gaaacgctggccgctgcattgctgaaaatggcacagggcgagcgtccgctgattctgcca
ccggatgcgccaatgcgtccgcgtcgcgaattccgcgaacgtgatgaccgtttcgaacgc
cgtggcgatcgcaacgaccgtggcccgcgcggcgagcgttccgagcgcggtggtgaagat
cgcccgcgtcgtgaacgtcgtgatgttggcgacatggaactgtaccgcattgaagtgggc
cgtgatgacggtgttgaagtacgtcatatcgttggcgcgattgctaacgaaggcgatatc
agcagccgttacatcggtaacatcaagctgtttggttctcactctactatcgagctgccg
aaaggtatgccgggtgaagttctgcagcacttcacgcgtacgcgtattctcaacaaaccg
atgaatatgcagttgctgggcgatgctcagccgcgcgagcgtaacgaacgtcgcggtggc
ggtgagcgccgtggtggttttggtggcgaacgtcgtgaaggcggtcgtagcgaaggccgt
cgtttcagcggtgagcgtcaggaaggccgtagttttggtggcgaacgtcgtgctccgcgc
cgcgatcgtgacgaaagcaccagccgtcgtcgcaacgacgcataa
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