Kosakonia oryzae: AWR26_04180
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Entry
AWR26_04180 CDS
T04433
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kor
Kosakonia oryzae
Pathway
kor03410
Base excision repair
kor03430
Mismatch repair
kor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AWR26_04180 (recJ)
03430 Mismatch repair
AWR26_04180 (recJ)
03440 Homologous recombination
AWR26_04180 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kor03400
]
AWR26_04180 (recJ)
DNA repair and recombination proteins [BR:
kor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AWR26_04180 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AWR26_04180 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AWR26_04180 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ANI81389
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All DBs
Position
860796..862529
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AA seq
577 aa
AA seq
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MKAQIQLRRRKVDDSAELAEGLPPLLRRLYASRGVRKASELERSVKGMLPWQQLTGIDEA
VSHLYQALREDLRIIVVGDFDADGATSTALSVLALRALGCENVSYLVPNRFDDGYGLSPE
VVDQAHARGAQLILTVDNGISSHAGVARAHELGIPVVVTDHHLPGDTLPDAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRAFLRDNGWFESRGLAMPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGRCRPGIKALLEIANRDAQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNLGEARQLANDLDALNQTRKEIEQGMQAEALTLCEQLERSRDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGVLKGSGRSIQGLHMRDALERLDMLYP
GMMLKFGGHAMAAGLTLEEHRFEEFQQRFGELVTEWLDPALLQGEIVSDGPLTPQEMTLD
VAEMLREAGPWGQMFPEPLFDGEFRLLQQRLVGERHLKVMLEPVGGGPLLDGIAFNVDTT
CWPDNGVRQVNIAYKLDVNEFRGNRSVQLIIENLWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagctcagatacaacttcgccgccgtaaggtggatgattctgcggaactggcggaa
ggcttaccgccgttactgcgtcggctctacgccagccgcggcgtgcgtaaggccagcgaa
ctggagcgcagcgtaaaaggcatgctgccctggcagcaacttaccggtattgatgaggca
gtttcgcacctttatcaggcgctgcgcgaagatttacgcattatcgtggtcggtgatttt
gatgccgatggcgcaaccagcacggcgctcagcgtcctggcgctgcgtgcgctgggctgt
gaaaatgtgagctacctggtgccgaaccgttttgacgacggttacggtctcagcccggaa
gtggtcgatcaggcgcatgcgcgcggcgcgcagttgatcctgacagtggacaacggtatt
tcctcgcatgccggggtggcgcgggcgcacgaactgggtattcctgtggtcgtgaccgat
caccatctgcctggcgataccctgccggatgcggaagccattgtgaaccccaacctgcgc
gactgtgatttcccgtcgaaatcgctggcgggcgtcggtgtcgctttttatctgatgctg
gcgctacgcgcttttctgcgcgacaacggctggtttgaatcgcgcggtctggcaatgccg
aatcttgcggaactgctcgatctcgtcgcgttgggaacggtagcagacgtggtgccgctt
gatgccaacaaccgtattctcacctggcaaggcctgagccggatccgcgccgggcgctgt
cgtcctggcattaaagcgctgcttgaaatcgccaatcgcgacgcgcagaaactggcggca
agcgacctgggttttgcgctgggcccacggctgaacgcggcgggcaggctggatgatatg
tcggtgggcgtcgcgctgctgttatgcgataacctcggcgaagcgcgtcagttggctaac
gatctggatgcgctgaatcagacgcgcaaagagattgaacaagggatgcaggccgaagcg
ctaaccttgtgcgagcagcttgaacgaagccgcgatacgttgcccggcgggctggcgatg
tatcatcctgaatggcatcagggggtggtggggatccttgcctcgcgtatcaaagagcgt
tttcatcggccggtgattgccttcgcgcctgctggcgatggcgttctgaaaggttccggg
cgttcaattcaggggctgcacatgcgtgatgcgctggagcgcctggatatgctctaccct
ggcatgatgcttaagtttggcggtcatgcgatggctgctggtttgacactggaagagcat
cgtttcgaagagtttcaacaacgcttcggcgaactggtgacggaatggctggatccggcg
ctgttgcagggtgagattgtttctgacggcccgctaacgccgcaagagatgacgctggat
gtcgccgaaatgctgcgtgaagccgggccgtgggggcaaatgttcccggagccgctgttc
gatggcgagtttcggctgttgcagcagcggctggtgggcgagcgtcacctgaaggtcatg
ctcgagccggtcggtggcggcccgctgcttgatggcatagcgtttaacgtcgataccacc
tgctggccggacaacggcgtgcggcaggtgaatattgcttataaacttgatgtcaacgag
ttccgcgggaatcgtagcgtacagcttatcatcgaaaatctctggccactttag
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