Kosakonia oryzae: AWR26_06545
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Entry
AWR26_06545 CDS
T04433
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kor
Kosakonia oryzae
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kor03009
]
AWR26_06545 (srmB)
Enzymes [BR:
kor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWR26_06545 (srmB)
Ribosome biogenesis [BR:
kor03009
]
Prokaryotic type
rRNA helicases
AWR26_06545 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANI81826
UniProt:
A0AA94H402
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All DBs
Position
complement(1354492..1355820)
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AA seq
442 aa
AA seq
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MTVTTFSELELDDSLLDALQDKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKNFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKTALLI
HLLKQPEVSRSIVFVRKRERVHELAGWLREAGINNCYLEGEMVQVKRNEAIKRLTDGRVN
VLIATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGAAISLVEAHDHLLL
GKVGRYVEEPLKARVVDELRPTTRVPNDKLKGKPSKKVLAKREEKKKEKEKPRVKLRHRD
TKNIGKRRKPSAASSGQQKTEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaactcgaacttgacgacagcctgctggacgcgctccag
gataaaggctttacgcgcccaaccgctatccaggcagctgccattccgcctgcgcttgag
gggcgtgacgtccttggttctgcgcctactggtaccggtaaaacggcggcctacctgctg
ccagcgttgcaacaccttctggactttccacgtaagaaatctggcccgccgcgtattctg
atcctgacgccaacccgcgaactggcaatgcaggttgccgatcatgcccgcgaactggcg
gcgaatacccatctggatatcgcgaccattaccggcggcgtcgcctatatgaaccacgct
gaagtgttcagcgaaaatcaggatatcgtggttgccaccaccggtcgcctgctgcaatac
attaaagaagagaacttcgactgtcgtgcggtagaaacgctgatcctcgatgaagccgat
cgcatgctggatatgggcttcgcgcaggatatcgagcacatcgcgggtgaaactcgctgg
cgcaaacagacgatgctgttctccgcaacgcttgaaggcgacgcgatcaaaaatttcgcc
gaacgtctgctggaagatccggtcgaagtctccgccacaccgtcaacgcgcgaacgtaag
aaaatccatcagtggtactaccgcgccgacaaccttgaacacaaaaccgcactgctgatc
cacctgctgaaacagccggaagtcagccgctctatcgtcttcgtgcgtaaacgtgaacgc
gtgcatgagctggcgggttggctgcgtgaagcgggcatcaataactgctatctcgaaggc
gagatggtacaggtgaagcgcaacgaagcgatcaaacgtctgaccgacggccgcgtcaat
gtgctgatcgccaccgatgttgctgcgcgtggtattgatattccggatgtcagccacgtc
attaacttcgatatgccgcgcagcggcgacacctacctgcaccgtattggccgcaccggc
cgcgccggtcgcaaaggagccgctatttctctggttgaagcgcacgatcacctgttgctg
ggcaaagtaggccgttacgttgaagagccgctgaaagcccgcgtcgtggacgaactgcgc
ccgacaacacgagtgccaaacgataagctgaaaggcaaaccgtcgaaaaaagtgctggcc
aaacgcgaagagaagaaaaaagagaaagagaagccgcgcgtgaagctacgccatcgcgat
accaaaaacatcggtaagcgacgcaagcccagtgctgcaagcagcgggcagcaaaaaaca
gaagagtaa
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