Kosakonia oryzae: AWR26_11865
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Entry
AWR26_11865 CDS
T04433
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kor
Kosakonia oryzae
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kor03032
]
AWR26_11865 (topA)
03400 DNA repair and recombination proteins [BR:
kor03400
]
AWR26_11865 (topA)
Enzymes [BR:
kor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AWR26_11865 (topA)
DNA replication proteins [BR:
kor03032
]
Prokaryotic type
DNA Topoisomerases
AWR26_11865 (topA)
DNA repair and recombination proteins [BR:
kor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AWR26_11865 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
ANI82816
UniProt:
A0AA94KPL5
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Position
2510250..2512847
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AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAPKKSADSASTKTAKKPK
KDERGALVNRMGIDPWHNWDAHYEVLPGKEKVVSELKSLAEKADHIYLATDLDREGEAIA
WHLREVIGGDEKRYSRVVFNEITKNAIRQAFETPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDAATATPGGDALPLQVTH
QGDKAFRPVNREQTMAAVSLLEKARYTVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAINMVRGYITDNFGKKYLPESANQYASKEN
SQEAHEAIRPSDVAVQAESLKDMETDAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPSVNKGDVLSLVELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDRVANHEAEWRKVLDSFFGDFSRQLEQAEQDPEAGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDDCKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTIVRFSRKTKQQYV
ASEKEGKATGWSAFYIDNKWTEAKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaataaatat
ctgggtaatgactatgtggttaaatccagtgttggtcatatccgtgatttgccgaccagt
ggctcagcacccaaaaagagcgcagactcagcctccaccaaaacggctaagaagcctaaa
aaggatgaacgcggcgctcttgtcaatcgcatggggatcgacccatggcacaactgggat
gcacattacgaagtgctgccaggcaaagagaaggtggtttctgaactgaaatcgctggct
gaaaaagccgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagtgatcggcggtgatgaaaaacgctacagccgcgtagtgtttaac
gaaatcaccaagaatgcgattcgccaggcttttgaaacgccgggtgaactgaatattgac
cgtgtgaatgcccagcaggcgcgccgctttatggatcgcgttgtgggttacatggtctct
ccgctgctgtggaagaaaattgcccgaggcctttctgctggccgcgtgcagtctgttgct
gttcgtctggtggttgaacgcgagcgcgaaatcaaagcctttgttccggaagagttctgg
gaaattgatgccgcgaccgcgacgcctggcggcgatgcattgccgctgcaggtgacgcat
caaggtgataaagcgttccgtccggtcaatcgcgagcagacaatggccgccgttagcctg
ctggagaaagcgcgttacaccgtactggagcgggaagataaaccgaccagcagcaagccc
ggtgcgccgtttatcacctccacgttgcagcaggccgccagcacgcgtctcggctttggc
gtgaagaaaaccatgatgatggcgcagcgtctgtacgaagccggttacatcacctacatg
cgtaccgactcaacgaatctgagccaggacgcgatcaacatggttcgcggctatattacc
gacaatttcggtaagaaatacctgccggaatcggctaaccagtacgccagtaaagaaaat
tcccaggaagcgcacgaagcgattcgtccttccgatgtcgcagtgcaggctgagtcgctg
aaggacatggaaaccgacgcgcagaagctgtatcagcttatctggcgccagtttgtcgcc
tgtcagatgacccctgcgcagtacgattccacgacgctgaccgtgggtgcgggtgatttc
cgcctcaaagcgcgcgggcgcattttgcgcttcgatggctggacaaaagtgatgccggca
ctgcgcaagggcgatgaagatcgcactctaccgtcagtgaataaaggtgatgtgctgtcg
ctcgtagaactgactccggcgcaacactttaccaagccgccagcgcgtttcagcgaagct
tcgctggttaaagagcttgaaaaacgcggcattggccgtccgtccacttatgcctcgatc
atttcgaccattcaggacaggggctatgtgcgcgtggaaaaccgtcgtttttacgcggaa
aaaatgggtgaaatcgtcaccgatcgcctggaagagaacttccgcgagctgatgaactac
gattttaccgcgcagatggaagacagtcttgaccgcgtcgcaaaccatgaagccgagtgg
cggaaggtgctggacagcttctttggcgatttttctcgccagcttgagcaagctgaacag
gatccggaagcgggcggtatgcgaccgaaccagatggtgctgaccagcatcgactgtccg
acctgcggccgtaaaatggggattcgtaccgccagtaccggcgtgttcctcggctgttcc
ggctatgcgctgccgccaaaagagcgctgtaagaccaccattaaccttgtgccggaaaac
gaagtgctcaatgtgctggaaggcgatgacgcggaaaccaacgcgctgcgcgccaaacgt
cgttgccagaagtgcggcacggcgatggacagctacctcatcgatccgaagcgcaaatta
catgtctgcggtaataacccgacctgtgatggctacgaaatcgaagagggcgagttccgc
atcaaggggtatgacggtccgatcgttgagtgtgagaaatgcggttctgaaatgcacctg
aaaatggggcgttttggtaagtacatggcatgtaccaacgacgattgcaaaaacacgcgt
aaaattctgcgtaacggtgaagttgcaccaccgaaggaagatccggtgccattaccggag
ctgccttgcgaaaaatccgacgcatatttcgtgctgcgtgatggtgctgccggggtgttc
ctcgccgccaataccttcccgaaatcgcgtgaaacacgtgcgccgctggtggaagaactg
taccgcttccgcgatcgtctgccggaaaaactgcgttacctggccgacgcgccgcagcag
gatccggaaggtaataaaacgattgtccgttttagccgtaaaaccaaacagcagtatgtg
gcatcggaaaaagagggcaaagcaacgggatggtcggctttctacattgataacaagtgg
actgaagctaaaaaataa
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