Kosakonia oryzae: AWR26_11930
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Entry
AWR26_11930 CDS
T04433
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
kor
Kosakonia oryzae
Pathway
kor02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWR26_11930 (pdeR)
Enzymes [BR:
kor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AWR26_11930 (pdeR)
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ANI82828
UniProt:
A0AA94KPL0
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All DBs
Position
complement(2524883..2526874)
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AA seq
663 aa
AA seq
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MKDSQEQNLLFRYLGSNSPFWRLSADSNALHFAPDETADISQVVPLTDEQAKQIREMTVI
TSSLTLHISVYGEEMTIHLVGRKISRREWAGTASAWDDTQSVARDLVQGLSFAEQVVSEA
NSVIVILDRLGNIQRFNRLSEEYTGMKEQEVIGQNVFKLFMSRSEAAASKRNITQFFREG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHEMISDAIAHRGDTQVGIVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLEEGQVLARLGGDEFIVLGTNTSQSTLEAMASRILTRLRQPFRIGLIEIYTGCSLGI
ALAPQHGTDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYIWLDTNLRRALEKN
QLVIHYQPKVTWRGEVRSLEALVRWQSPERGLIPPLDFIAYAEESGLIVPLGRWVMLEVV
RQLAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALHDLNFEHCPIDVELTESCLIENA
ELALSVIQQFSALGAQVHLDDFGTGYSSLSQLARFPLDAIKLDQSFVREIHKQSVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVSERQGFLFAKPMPAAAFERWFKRYQAR
KTR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagactcgcaggaacagaatctgctgtttcgttacctgggttcgaatagcccattc
tggcgattgagcgccgatagcaacgccctgcactttgcccccgatgaaactgccgatatc
agccaggtggtgcctctgactgatgagcaggcgaaacagatccgcgaaatgacggtgatc
acttccagcttaaccttgcatatttccgtttacggtgaagagatgactatccatctggtc
gggcgcaaaatttcccgccgcgaatgggctggcaccgcttcagcctgggacgatacgcag
tctgtcgcccgtgacctggttcaggggctctcttttgccgaacaggttgtttcggaagcc
aattcagtgatcgtgatcctcgatcgcctcggcaatatccagcgctttaaccggttgagc
gaagaatataccgggatgaaagagcaggaagtgatcgggcaaaatgtctttaagctgttt
atgagccgtagtgaagccgccgcctcaaagcgcaatatcacgcaattttttagggaaggt
tcatcctatgaggtggagcgctggatcaaaacgcgcaaaggccaacgcctgtttctgttt
cgcaataagttcgtccacagcggcagcggtaaaaacgagatcttcctgatttgctcgggc
acggatattaccgaggagcgccgggcgcaggaacgattgcgggtgctggcgaatactgac
accatcaccggtttacctaaccgcaatgccattcatgagatgatcagcgacgccattgcc
catcggggcgatacgcaggtcgggattgtgtatctcgatttagataacttcaaaaaagtt
aacgacgcgtatggccacatgtttggcgatcagctgttacaggcggttgcactggctatt
ttgagctgccttgaagaaggccaggtgctggcaaggctcggcggcgatgaatttatcgtg
ctggggacgaacacttcgcagagcactctcgaagcaatggcttcccgcatactgacacgc
ctgcgtcagcccttccgtatcgggcttatcgaaatttatacggggtgttcgctgggtatt
gcgcttgcgccgcagcacggtaccgatcgcgaaagcgtgatccgcaacgccgacacggcg
atgtataccgccaaagagaatggtcgcgggaaattttgcgtcttctcgccggagatgaat
cagcgtgtttttgaatatatctggctggataccaacctgcgccgggcgctggaaaaaaac
cagctggtcattcactatcaacccaaagtgacctggcgcggcgaagttcgcagcctggaa
gcgctggtgcgctggcaatcgccggagcgtggattgatcccgccgctggattttattgcc
tatgcggaagagtccgggctgattgttccgctcgggcgatgggtcatgctggaggtggtg
cgtcagctcgcgaaatggcgagacaaagggatcaatttgcgcgtcgcggtcaacgtttca
gcgcgccaactcgctgaccagacgatttttagcgatctgaaacaggcgcttcatgacctt
aattttgaacactgtcctattgatgtcgaactgaccgaaagctgcctgattgaaaacgcc
gaactggcgctgtcggttattcagcaattcagcgcattaggcgcgcaggtgcatctggat
gatttcggcaccggctactcgtctctgtcgcagctggcgcgttttcccctggacgccatt
aagctcgaccaatcttttgtccgtgaaattcataaacaatccgtttcgcaatcgctggta
cgtgcgattgtcgccgtggcgcaggcgctgaatttgcaggtgatcgccgaaggggtagag
agcgcaaaagaagacgcctttctgaccaagaacggcgtcagtgagcggcaggggtttctg
tttgccaaaccgatgcccgctgccgcgtttgagcgctggtttaagcgctaccaggcgcga
aagacgcgctag
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