Kosakonia oryzae: AWR26_13360
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Entry
AWR26_13360 CDS
T04433
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
kor
Kosakonia oryzae
Pathway
kor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AWR26_13360 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kor03000
]
AWR26_13360 (nifA)
Transcription factors [BR:
kor03000
]
Prokaryotic type
Helix-turn-helix
Other families
AWR26_13360 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_16
AAA_3
HTH_23
MCM
bpMoxR
Parvo_NS1
TIP49
C166
Motif
Other DBs
NCBI-ProteinID:
ANI83099
LinkDB
All DBs
Position
2846504..2848078
Genome browser
AA seq
524 aa
AA seq
DB search
MTQRTESGTTVWRFDLSQQFTAMQRISVVLSRATEVGQTLQEVLCVLHNDAFMQHGMICL
YDSQQAILNIEALQEADQQLIPGSSQIRYRPGEGLVGTVLSQGQSLVLPCVSDDQRFLDR
LGLYDYSLPFIAVPLMGPNSQPIGVLAAQPMARYEERLPACTRFLETVANLVAQTVRLMT
PPSVAPSPRAAAAQIASQRGCAPSRAFGFENMVGKSAAMRQTLEIIRQVSRWDTTVLVRG
ESGTGKELIANAIHHNSPRAAAPFVKFNCAALPDTLLESELFGHEKGAFTGAVRQRKGRF
ELADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLQVNVRIIAATNRNLEEEV
RLGNFREDLYYRLNVMPISLPPLRERQEDIAELAHFLVRKIAQNQNRTLRISDGAIRLLM
SYSWPGNVRELENCLERSAVMSESGLIDRDVILFHHRENLPKPPQPSAPREESWLDQNLD
ERQRLIAALEKAGWVQAKAARLLGMTPRQVAYRIQTMDITMPRM
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcgaaccgagtcgggtacaaccgtctggcgctttgacctctcccagcagttt
accgccatgcagcgtatcagcgtggtgttaagccgggcgacggaggtcgggcagacgcta
caggaagtgctgtgcgtgctgcacaacgatgcttttatgcagcacgggatgatctgtctg
tacgacagccagcaagcgatccttaacattgaagccttgcaggaggccgatcagcagctt
attcccggcagttcgcagattcgctatcgtccaggtgaagggctggtaggcacagtgctg
tcgcagggacaatcgctggtgctgccctgtgtctccgacgatcagcgttttctcgatcgc
cttggcttgtatgattacagcctgccgtttatcgccgtgccgctgatgggaccaaactca
cagcccatcggcgtgctggccgcccagccaatggcccgctacgaggaacgcctgcccgcc
tgcacgcgttttctggaaactgtcgccaatctggtggcgcaaactgtccgcctgatgacg
ccgcccagcgtcgcgccttcaccccgtgctgctgccgcgcagatcgccagccagcgcggg
tgcgcgccgtcgcgagcgtttggctttgaaaacatggtcggtaaaagcgcggccatgcgc
cagacgctggaaattattcgccaggtctcgcgctgggacaccaccgtgctggtgcgtggc
gaaagcggaaccggtaaggagctgatagccaatgctatccaccacaattcaccgcgcgcc
gctgcgccgttcgtcaaattcaactgcgcggcgctgcccgatacgctgctggagagtgaa
ctcttcggccacgaaaaaggggcgtttaccggcgcggtgcgtcagcgtaaaggccgcttc
gaactggcggacggcggtacgctgtttcttgatgagatcggcgaaagtagcgcctcgttt
caggcgaaattgctgcgtatcttgcaggaaggcgaaatggaacgcgtcggcggcgacgaa
acgctgcaggtgaatgtacggatcattgccgccaccaaccgcaatctggaagaggaagtg
cggctgggaaattttcgcgaagatctctactatcgcctcaatgtgatgccgatctccctg
cccccgctccgcgagcgccaggaggacattgccgagctggcgcattttctggtgcgcaaa
atcgcgcaaaaccagaaccgcacgctgcgcatcagcgatggcgcgatccggttgttgatg
agctatagctggcctggaaacgtgcgtgaactggaaaactgccttgagcgatcggcggtg
atgtcggaaagcggactcatcgatcgcgacgtgattttatttcaccaccgggaaaatctg
ccaaaaccgccgcagcccagcgcaccgcgcgaagagagctggctcgatcagaatctcgat
gagcgacaaagattgatcgccgcgctggagaaagccggttgggtacaggcaaaagctgcg
cgtctgctgggaatgaccccgcgccaggtggcttaccgtattcagaccatggacattacc
atgccgagaatgtag
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