Kosakonia oryzae: AWR26_16360
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Entry
AWR26_16360 CDS
T04433
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
kor
Kosakonia oryzae
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kor01002
]
AWR26_16360 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kor01011
]
AWR26_16360 (ldtD)
Peptidases and inhibitors [BR:
kor01002
]
Cysteine peptidases
Family C82
AWR26_16360 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
kor01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AWR26_16360 (ldtD)
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ANI83653
UniProt:
A0AA94H0Y3
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Position
complement(3470385..3472187)
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AA seq
600 aa
AA seq
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MLLKKLNGRRMSALSLCLALAFAPLFSVQADEPEIVPVDSSATPGDQPTVLQQPQAQSPA
TAMLIGVKPYPAGVSVADVRAQLQSQLPANWTPIFMNQLAALYAARGQKPMWDNRDAVQA
FQQQLAEVAIAGFQPQFTTWVELLTDPDVSGMARDVVLSDAMLGYLHFVAGIQAKGQRWL
YSDKPYALATPAISVINQWQLALDNGSLPSFIQSLAPHHPQYAAMHQSLLTLVGDSRPWP
QIASNVTLRPGQWSNDVPALREILQRTGMLEGGPNIVLPGDQVAVSTSAASTRKKVPTRA
AYDRQLVEAVKRFQAWQGLHADGVIGQGTRDWLNVSPSQRAALLALNIQRLRLLPVTLST
GIMVNIPEYSLVYYLNGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARQD
ILPKVLNDPTYLERHGYTVLRGWNSKEAIDPSMVDWATITPSNLPFRFQQAPGVQNSLGR
YKFNMPSSDAIYLHDTPNHNLFQKETRALSSGCVRVNKASELANMLLQDAGWNDTRISDA
LKQGDTRYVNIRHNIPVNLYYLTAFVGADGRTQYRTDIYNYDLTARSGAQILPKAEQLIR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaagaagttaaatggtcgtcggatgtcagcgctgagtttgtgcctggcactg
gcatttgctccactgttcagcgtacaggccgatgagcctgaaatagtgccggttgacagt
tccgccacgccgggcgatcagccgaccgtgttacagcagccgcaggcacaatcgcctgct
accgccatgttaatcggcgtgaagccttatcctgccggtgtttctgtggcagatgttcgc
gcacagttgcagtcgcaattgcctgccaactggacgcccatctttatgaatcaactggca
gccctgtatgccgcgcgcggccagaaacccatgtgggataaccgcgatgcggtgcaggcg
tttcaacagcaactggcagaagtggcgattgccggttttcagccgcaattcaccacctgg
gttgagctgttaaccgatccggatgtttccggtatggcgcgtgatgtagtgctctctgac
gccatgctgggctatctgcattttgttgccggtattcaggcgaaaggccagcgctggctt
tatagcgacaaaccctatgcgctggcaacgccggcgatttcagtgatcaatcagtggcaa
ttggcgctggataacggttcgctgccgtcattcatacagagccttgcgccacatcatccg
caatatgccgccatgcaccagtcactgctgacgctggtgggggattctcgcccgtggccg
caaatcgccagtaacgttacgctgcgaccagggcagtggagcaacgatgttccggcgttg
cgcgagatcctgcaacgcaccggcatgctggaaggcgggccgaacatcgtgttgcctggc
gatcaggttgcagtcagcacctctgcggcgtcgaccagaaaaaaagtaccgacgcgcgcg
gcttacgatcggcaactggttgaggcagtaaaacgctttcaggcctggcaggggctgcat
gccgatggtgtgattggccagggcacgcgtgactggctgaatgtcagcccgtcgcagcgc
gctgcattgctggcgctcaatatccaacggctgcgtctgctgccggtgacgctttccacc
ggcattatggtgaatattccggagtactcgttggtttattatctcaacggcagccaggtg
ctggcgtcgcgggtgattgttggacgccccgatcgcaaaacgccgatgatgagcagtgcg
ctgaacaatgtggtggtcaatccgccgtggaatgtaccgccaacgctggcgcgccaggat
attcttccgaaggttctgaacgatccgacataccttgaacgccacggttataccgtgctg
cgcggctggaacagcaaagaggcgatcgacccgtcaatggttgactgggcgacgattacg
ccatcgaatctaccgttccgtttccagcaggcgccgggtgtacagaactcccttggtcgt
tacaaattcaatatgccgagctctgatgccatctatttgcatgacacgccgaaccataac
ttgttccagaaagagacgcgggcgctgagttctggttgtgtgcgggtgaataaggcgtct
gaactggcaaatatgctgttgcaggatgctggatggaacgatacgcgtatctctgatgcc
ttaaagcagggagatacccgttacgtaaatattcgacacaatatccccgtgaatctctac
tatctgactgcgtttgtgggggccgatggtcgcacgcagtatcgtacagatatttacaat
tacgatcttactgcgcgatcgggcgcacaaatcttgccaaaagctgaacaattaatcaga
taa
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