KEGG   Kosakonia oryzae: AWR26_16360
Entry
AWR26_16360       CDS       T04433                                 
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
  KO
K21470  L,D-transpeptidase YcbB
Organism
kor  Kosakonia oryzae
Brite
KEGG Orthology (KO) [BR:kor00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:kor01002]
    AWR26_16360 (ldtD)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:kor01011]
    AWR26_16360 (ldtD)
Peptidases and inhibitors [BR:kor01002]
 Cysteine peptidases
  Family C82
   AWR26_16360 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:kor01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   AWR26_16360 (ldtD)
SSDB
Motif
Pfam: YkuD Scaffold PG_binding_1
Other DBs
NCBI-ProteinID: ANI83653
UniProt: A0AA94H0Y3
LinkDB
Position
complement(3470385..3472187)
AA seq 600 aa
MLLKKLNGRRMSALSLCLALAFAPLFSVQADEPEIVPVDSSATPGDQPTVLQQPQAQSPA
TAMLIGVKPYPAGVSVADVRAQLQSQLPANWTPIFMNQLAALYAARGQKPMWDNRDAVQA
FQQQLAEVAIAGFQPQFTTWVELLTDPDVSGMARDVVLSDAMLGYLHFVAGIQAKGQRWL
YSDKPYALATPAISVINQWQLALDNGSLPSFIQSLAPHHPQYAAMHQSLLTLVGDSRPWP
QIASNVTLRPGQWSNDVPALREILQRTGMLEGGPNIVLPGDQVAVSTSAASTRKKVPTRA
AYDRQLVEAVKRFQAWQGLHADGVIGQGTRDWLNVSPSQRAALLALNIQRLRLLPVTLST
GIMVNIPEYSLVYYLNGSQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARQD
ILPKVLNDPTYLERHGYTVLRGWNSKEAIDPSMVDWATITPSNLPFRFQQAPGVQNSLGR
YKFNMPSSDAIYLHDTPNHNLFQKETRALSSGCVRVNKASELANMLLQDAGWNDTRISDA
LKQGDTRYVNIRHNIPVNLYYLTAFVGADGRTQYRTDIYNYDLTARSGAQILPKAEQLIR
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgttgcttaagaagttaaatggtcgtcggatgtcagcgctgagtttgtgcctggcactg
gcatttgctccactgttcagcgtacaggccgatgagcctgaaatagtgccggttgacagt
tccgccacgccgggcgatcagccgaccgtgttacagcagccgcaggcacaatcgcctgct
accgccatgttaatcggcgtgaagccttatcctgccggtgtttctgtggcagatgttcgc
gcacagttgcagtcgcaattgcctgccaactggacgcccatctttatgaatcaactggca
gccctgtatgccgcgcgcggccagaaacccatgtgggataaccgcgatgcggtgcaggcg
tttcaacagcaactggcagaagtggcgattgccggttttcagccgcaattcaccacctgg
gttgagctgttaaccgatccggatgtttccggtatggcgcgtgatgtagtgctctctgac
gccatgctgggctatctgcattttgttgccggtattcaggcgaaaggccagcgctggctt
tatagcgacaaaccctatgcgctggcaacgccggcgatttcagtgatcaatcagtggcaa
ttggcgctggataacggttcgctgccgtcattcatacagagccttgcgccacatcatccg
caatatgccgccatgcaccagtcactgctgacgctggtgggggattctcgcccgtggccg
caaatcgccagtaacgttacgctgcgaccagggcagtggagcaacgatgttccggcgttg
cgcgagatcctgcaacgcaccggcatgctggaaggcgggccgaacatcgtgttgcctggc
gatcaggttgcagtcagcacctctgcggcgtcgaccagaaaaaaagtaccgacgcgcgcg
gcttacgatcggcaactggttgaggcagtaaaacgctttcaggcctggcaggggctgcat
gccgatggtgtgattggccagggcacgcgtgactggctgaatgtcagcccgtcgcagcgc
gctgcattgctggcgctcaatatccaacggctgcgtctgctgccggtgacgctttccacc
ggcattatggtgaatattccggagtactcgttggtttattatctcaacggcagccaggtg
ctggcgtcgcgggtgattgttggacgccccgatcgcaaaacgccgatgatgagcagtgcg
ctgaacaatgtggtggtcaatccgccgtggaatgtaccgccaacgctggcgcgccaggat
attcttccgaaggttctgaacgatccgacataccttgaacgccacggttataccgtgctg
cgcggctggaacagcaaagaggcgatcgacccgtcaatggttgactgggcgacgattacg
ccatcgaatctaccgttccgtttccagcaggcgccgggtgtacagaactcccttggtcgt
tacaaattcaatatgccgagctctgatgccatctatttgcatgacacgccgaaccataac
ttgttccagaaagagacgcgggcgctgagttctggttgtgtgcgggtgaataaggcgtct
gaactggcaaatatgctgttgcaggatgctggatggaacgatacgcgtatctctgatgcc
ttaaagcagggagatacccgttacgtaaatattcgacacaatatccccgtgaatctctac
tatctgactgcgtttgtgggggccgatggtcgcacgcagtatcgtacagatatttacaat
tacgatcttactgcgcgatcgggcgcacaaatcttgccaaaagctgaacaattaatcaga
taa

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