Kosakonia oryzae: AWR26_17205
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Entry
AWR26_17205 CDS
T04433
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kor
Kosakonia oryzae
Pathway
kor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWR26_17205 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kor03019
]
AWR26_17205 (rhlE)
Enzymes [BR:
kor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AWR26_17205 (rhlE)
Messenger RNA biogenesis [BR:
kor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AWR26_17205 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ANI83811
UniProt:
A0AA94KNK5
LinkDB
All DBs
Position
complement(3685940..3687385)
Genome browser
AA seq
481 aa
AA seq
DB search
MSFDALGLNPEILRAIAEQGYVQPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QLLVQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSQYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNALKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPPR
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGITSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAAIGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIEGYEPDPSIKAEPIQNGRGQGGGRQGGGRGQGGGGRGQSAPRRNEGE
EQKPRSPRRTDGEAQKPRAPRRSEGGSRRLDGNAQPARDGQSKPAGNGARRRRPRKPTAA
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgatgcccttggcctgaatccggaaattctgcgcgcaatcgccgagcagggt
tatgttcagccgacccctattcagcagcaggcgatccccgccgtactgcaaggccgcgat
ctgatggccagcgcccagaccggtaccggtaaaacggctggcttcaccctgccgttgctg
caactgctggtgcaaaaagagccgcacgcgaaaggccgccgcccggtgcgtgcgctgatc
ctgacgccaacccgtgaactggcggcgcaaatcggtgaaaacgtacgcgactacagccag
tatctgaacatccgttcgctggtggtgtttggcggcgtcagcatcaacccgcagatgatg
aaactgcgcggtggcgttgatgtgctggtggctacgcctggccgtctgctggatctggaa
caccaaaacgcgctgaaactcgatagcgtggaaattctggtgctggatgaagccgaccgc
atgctggatatgggctttatccacgatattcgccgcgtgctggcaaaactgccgccgcgc
cgtcagaacctgctgttctccgcgaccttctccgacgacatcaaagcgctggcggaaaag
ctgctgcataacccgctggaaattgaagtggcacgccgcaacaccgcctccgagcaggtg
acgcagcatgtgcattttgtagataaaaaacgtaagcgtgagctgctgtcacagatgatt
ggtcaggggaactggcagcaggtgctggtctttacccgcaccaagcacggcgccaaccac
ctggcggaacaactgaataaagatggcatcaccagtgcggcgatccacggtaacaagagc
cagggcgcacgtacccgtgcgctggcagatttcaaatccggggatattcgcgtgctggtg
gccacggatatcgccgcgcgcggtctcgacatcgaagagctgccgcacgtagtgaactac
gagctgccaaacgtaccggaagattacgtccaccgtatcggccgtaccgggcgcgcggcg
gctatcggtgaagcgctgtcgctggtctgcgttgatgaacacaaactgctgcgcgacatt
gaacgtctgctgaaaaaagagatcccacgcattgccatcgaaggctatgagccggatccg
tccatcaaagccgaaccgatccagaatggtcgcggccaggggggcggtcgtcagggtggt
ggccgcgggcagggcggtggtggacgtggtcagtctgcgccgcgccgcaatgagggcgag
gagcagaaaccgcgttccccgcgtcgcacggatggtgaagcgcaaaaaccacgtgctcca
cgccgcagtgaagggggttcacgccgtctggatggtaacgctcagcctgcgcgtgacggc
cagagtaaaccggcaggaaacggcgcccgccgtcgccgtccgcgtaaaccgaccgccgct
cagtaa
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