Kosakonia oryzae: AWR26_20600
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Entry
AWR26_20600 CDS
T04433
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kor
Kosakonia oryzae
Pathway
kor03030
DNA replication
kor03430
Mismatch repair
kor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWR26_20600 (dnaE)
03430 Mismatch repair
AWR26_20600 (dnaE)
03440 Homologous recombination
AWR26_20600 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kor03032
]
AWR26_20600 (dnaE)
03400 DNA repair and recombination proteins [BR:
kor03400
]
AWR26_20600 (dnaE)
Enzymes [BR:
kor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWR26_20600 (dnaE)
DNA replication proteins [BR:
kor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWR26_20600 (dnaE)
DNA repair and recombination proteins [BR:
kor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWR26_20600 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ANI84435
UniProt:
A0AA94H6Z8
LinkDB
All DBs
Position
complement(4393936..4397418)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGTAHGA
GMKPIVGADLHVQSDLLGDELTQLTVLAANNTGYQNLTLLISRAYQRGYGALGPWIDRDW
LQELSEGLILLSGGRMGDVGKSLLRGNSVLVEQCLDFYKEHFPDRYYLELIRTGRVDEEP
YLHAAVQLAEEHGLPVVATNDVRFIDADDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVEKSKVGL
EERLAFLFPDEQVRAEKRPPYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHSKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLEGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactattccatgattgacggg
ctggcgaaaaccgggccgctggtgaaaaaggcggccgcgctcggcatgcccgcgctggcg
attaccgattttacgaacctctgtggtctggtgaaattctacggaacggcgcacggagcc
gggatgaaaccgatcgtcggcgccgatctgcatgtacagagcgatctgttaggcgatgaa
ctgacgcagctcaccgtccttgcagccaacaataccggttaccagaatctgacattgctg
atttcgcgtgcctaccagcgtggctatggcgcactggggccgtggatcgatcgcgactgg
ttgcaggaactcagcgaagggttgatcctgctctccggcgggcgcatgggcgacgtgggt
aaaagcctgttgcgtggcaacagcgtgctggttgaacagtgtctcgatttctacaaagag
cattttcccgatcgctactaccttgagttgatccgcacgggtcgtgttgatgaagagcct
tatctgcacgcagcagtacaactggctgaagagcatggtttgccggtcgtggcgaccaat
gatgtgcgctttattgatgcagacgacttcgacgcgcatgagatccgtgtcgccatccac
gacggtttcaccctggacgatcccaaacgtccgcgcaattactccgcgcagcaatatatg
cgcagcgaagaggagatgtgcgaactcttctccgatatcccggaagcgctggaaaacacc
gtcgaaatcgccaagcgctgtaacgttacggtgcgtctgggtgagtacttcctgccgcag
ttcccgaccggtgatatgaccactgaagacttcctcgtggagaaatcaaaagtcggtctc
gaagaacgccttgcgttccttttcccggatgagcaggttcgtgcagagaagcgtccgccg
tacgacgagcgtcttgatatcgagctgcaagttatcaaccagatggggttccctggttac
tttctgatcgtgatggagtttatccagtggtcaaaagataacggcgtgccggtagggccg
gggcgtggttcgggcgcgggatcgctggtggcttatgcgctgaaaattactgacctcgat
ccgctggaatttgacctgctgttcgaacgtttccttaacccggaacgtgtatcgatgccc
gacttcgacgttgacttctgtatggagaagcgtgaccaggtgatcgagcacgtggcggac
atgtatgggcgcgatgcggtatcgcagatcatcaccttcggaaccatggcggcgaaagcg
gttatccgcgatgtgggtcgcgtactgggtcacccgtacggctttgtggaccgtatctct
aaactggtgccgccggatccgggcatgacgctggcgaaggcgttcgaagccgagccgcaa
ctgccggaaatctacgaagcggacgaagaagttaaagcgctgatcgacatggcgcgcaag
ctggaaggggtgacgcgaaacgcgggtaaacacgcaggtggcgtggtaatcgcacccacc
aaaatcaccgactttgccccgctgtactgtgatgaagccggtcagcacccggttacccag
tttgataaaaacgatgttgaatatgccgggctggtgaagtttgacttccttggtttgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacgcccggcgcgagaagaacggc
gagccgccgctcgatatcgccgccattccgctggatgacaagaaaagtttcgacatgctg
caacgctcggagaccactgcggtgttccagcttgaatcccgtggcatgaaagatttgatt
aagcgcctgcaacccgactgcttcgaagacatgatcgcgctggtggccctgttccgcccg
gggccgttgcagtcaggcatggtagataacttcatcgaccgtaaacacgggcgcgaagag
atctcctatcccgatgtgcagtggcagcatgaaagcctgaaaccggtactggagccgacc
tacggcattatcctctaccaggaacaggtgatgcagattgcccaggtgctttcgggttat
acccttggcggcgcggacatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggaaccttcgaagagggcgcgaagaaaaatggcatcgacggcgaactg
gcgatgaaaatctttgacctggtagaaaaattcgccgggtacggatttaacaaatcgcac
tctgccgcctatgctttggtctcataccagacgctgtggttgaaagcgcactatccggcc
gagtttatggcggcggtgatgacggccgatatggacaacaccgaaaaagtcgttggtctg
gtggatgagtgctggcgcatggggttgaaaatcctgccgccggatattaactccgggttg
taccatttccacgtcaacgatgacggtgaaattgtttacggtatcggggcgattaaaggt
gttggtgaaggcccgattgaggcgatcatcgaagcgcgtaataacggcggatacttccgt
gaactgtttgatctgtgcgcgcgtaccgacattaaaaagcttaaccgccgggtgctggaa
aaactgattatgtccggggcgtttgaccgccttgggccgcatcgcgcagcgctaatgaac
tcgctgggcgatgcgcttaaagccgccgatcagcattcgaaagccgaggcgattggccag
gccgatatgttcggcgtgctggccgaagagccagagcagatagaacaatcttacgccagt
tgccagccgtggccggaacaggtggtgctggaaggcgagcgtgaaacgttaggtctctac
cttacgggtcacccgattaaccagtatttgaaagaaattgagcgctatgtcggaggctac
cggctgaaagacatgcatccgaccgaacgtgggaaagttaccacagcggcggggctcgtc
attgccgcgcgggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgttagat
gaccgttccgggcgtctggaagtgatgttattcactgatgccctggataaataccagcag
ctgctggaaaaagaccgcatacttattgtcagcggacaggtcagctttgatgactttagc
gggggacttaaaatgaccgcccgtgaagtcatggacattgacgaagcccgggaaaaatac
gcccgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaaccattccagtacatctctactatcag
agggcggatgcgcgcgcgcggttacgtttcggcgcaacgtggcgcgtctctccgagcgat
cgtttactcaacgatctgcgtggcctcataggttcggagcaggtggaactggagtttgac
taa
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