Kosakonia oryzae: AWR26_24370
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Entry
AWR26_24370 CDS
T04433
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kor
Kosakonia oryzae
Pathway
kor03030
DNA replication
kor03410
Base excision repair
kor03420
Nucleotide excision repair
kor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWR26_24370 (polA)
03410 Base excision repair
AWR26_24370 (polA)
03420 Nucleotide excision repair
AWR26_24370 (polA)
03440 Homologous recombination
AWR26_24370 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kor03032
]
AWR26_24370 (polA)
03400 DNA repair and recombination proteins [BR:
kor03400
]
AWR26_24370 (polA)
Enzymes [BR:
kor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWR26_24370 (polA)
DNA replication proteins [BR:
kor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AWR26_24370 (polA)
DNA repair and recombination proteins [BR:
kor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AWR26_24370 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWR26_24370 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
QSV12485
LinkDB
All DBs
Position
complement(5356629..5359415)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LAREAEKMGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPDEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLTFRGAKNMAAKLEQNK
EVAYLSYQLATIKTDVQLELTCEQLEVQQPAVQELLGLFKQYEFKRWITDVEAGKWLQAK
SAKPAAKPQETIVVEAEADMPAATLSAEQYVTILDEETLQQWIAKLKSAPLFAFDTETDS
LDNISANLVGLSFAIEPGVAAYVPVAHDYLDAPDQIDRDRVLELLKPLLEDENARKVGQN
LKYDRGVLENYGIELRGIVFDTMLESYTLDSVVGRHDMDSLSERWLQHKTITFEEIAGKG
KNQLTFNQIALEQAGRYAAEDADVTLQLHLKMWPELQKNAGPLNVFQNIEMPLVPVLSRI
ERNGVNIDPAVLHKHSEELTLRLAELEKKAHDIAGEPFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNDEGRRIRQAFIAPKDYVIVSADYSQIELRIMAHLSRD
KGLLSAFAEGKDIHRATAAEVFGLPLESVSNEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQKYMDLYFERYPGVLEYMERTRAQAKDRGYVETLEGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDGWLQSEKPRVRMIMQVHDELVFEVHKDDVDAVSKKI
HELMESSTTLDVPLLVEVGSGQNWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaatccccttatccttgttgacggttcatcttacctctatcgc
gcatatcatgcgttcccgccgctaaccaacagcgccggagaacccaccggtgccatgtac
ggcgtgctgaatatgctgcgtagcctgatcctgcaatatcagccgacccatgccgccgtg
gtgtttgatgcgaaaggaaaaaccttccgtgatgagctgtttgagcattacaaatctcat
cgtcctccgatgccagacgatctgcgtgcgcaaatagaaccgctgcacgccatggttaaa
gcgatgggcctgccgttattggcggtttctggcgtggaagcggatgatgtgatcggcacg
ctggcgcgagaagccgagaaaatgggacgcccggtgctgatcagtaccggtgataaggat
atggcgcaactggtaacgccgggtatcacgttgatcaatactatgaccaacaccattctc
ggcccggatgaggttgtcactaaatacggtgtaccgcctgaactgatcatcgatttcctg
gcgctgatgggcgactcctccgataacattccgggcgttcctggcgtgggtgagaaaacc
gcgcaggcgctgctacaagggctgggtggtctggatacgctgtatgctgaatcagataaa
attgccggactgaccttccgtggtgcaaaaaacatggccgcgaagctggagcagaataaa
gaggtggcgtacctctcttatcaactggcgaccatcaaaaccgatgtccaactggaactg
acgtgtgagcaactggaagtgcagcaacctgcggttcaggaactgcttgggttgtttaag
caatatgaattcaaacgctggataacagacgtcgaagccggtaaatggttgcaagcgaaa
agcgcgaaacctgcggcgaaaccgcaggaaaccattgtggtggaagcggaagctgatatg
ccggccgccacactctctgcggaacaatacgtcactattcttgacgaagagacgttgcaa
cagtggatcgcgaaactgaagagcgcgccgctgtttgcctttgataccgaaacggacagc
ctcgataatatcagtgctaatctggttggcctctcctttgcgattgaaccaggcgtcgcc
gcttatgtgccggtcgcgcatgattatcttgatgcgcctgaccaaatcgaccgcgatcgc
gtgttagaactgcttaaaccgctgctggaagatgagaatgcccgcaaagtagggcaaaac
ctgaaatacgatcgcggtgtgctggaaaactacggcattgagctacgcggtatcgtgttc
gacaccatgctcgaatcctacacgttggatagcgttgtcggccgccacgatatggacagc
ctgtctgaacgctggttgcagcataagaccatcacttttgaagagattgccggcaagggc
aaaaaccagcttacttttaaccaaatcgctctggaacaggcggggcgctacgcggcggaa
gatgctgatgtcacgctgcaactgcatcttaagatgtggccggagttgcaaaaaaatgcc
gggccgctgaatgtattccagaatatcgaaatgccgctggtgccagtgctctcgcgcatt
gaacgtaacggcgtcaatattgatcctgcggtgctgcataagcattccgaagagctgaca
ttgcgcctggctgagctggagaaaaaagcgcacgacattgcaggtgagccatttaacctc
tcatcaaccaagcagttgcaaaccattctgtttgaaaaacaggggattaaaccgctgaag
aaaacgccgggcggcgcgccttcaacgtcagaagaggtgctggaagagctggcgcttgat
tatccgttgccgaaagtcattctggaataccgtgggttggccaagctcaaatcaacctac
accgacaagctgccgctgatgattaatccaaaaaccggccgtgtacacacctcgtatcac
caggcggtaacggcaaccgggcgtttgtcatctaccgatccaaacctgcaaaacattccg
gtgcgcaatgatgaagggcgacgcattcgccaggcgtttattgcgccgaaagattatgtg
attgtctcggcagactactcgcaaattgaactgcgtattatggcgcatttgtcgcgcgat
aaaggcctgctgtcagcctttgctgaaggtaaagatattcaccgggcgaccgccgccgaa
gtcttcggtttgccgctggaaagcgtaagcaatgaacagcgtcgcagtgcgaaagcgatc
aactttggtttgatctacggaatgagtgcctttggtttgtcccgacagcttaatattccg
cgcaaagagtcgcagaagtatatggatctttactttgagcgttaccctggcgtactggag
tatatggagcgcacacgggcgcaggcgaaagatcgcggttatgtggaaacgctggagggc
cgtcgtctctatttgccggacatcaaatcaagcaatgccgcccgacgtgcaggggcggag
cgtgcagcaatcaacgcaccgatgcagggtacggcggccgatatcatcaaacgggcaatg
attgccgtggatggctggctgcaaagcgaaaaacctcgcgtgcgtatgatcatgcaggtg
cacgatgaactggtgttcgaagtgcataaagatgacgttgatgccgtgtcgaaaaagatc
catgaattaatggaaagcagcaccacgcttgatgtgcctttgctggtggaagtggggagc
gggcaaaactgggatcaagcgcactaa
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