Kordia sp. SMS9: KORDIASMS9_00176
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Entry
KORDIASMS9_00176 CDS
T05562
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
kos
Kordia sp. SMS9
Pathway
kos00300
Lysine biosynthesis
kos00550
Peptidoglycan biosynthesis
kos01100
Metabolic pathways
kos01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KORDIASMS9_00176 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KORDIASMS9_00176 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KORDIASMS9_00176 (murF)
Enzymes [BR:
kos01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
KORDIASMS9_00176 (murF)
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AXG67994
UniProt:
A0A345GUK6
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Position
202403..203677
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AA seq
424 aa
AA seq
DB search
MIQDLYAKFQQHPIASTDSRNITPNCIFFALKGDNFNGNKYAEDALKKGAAFAVIDESAY
KTSEQTILVENVLETLQQLASYHRKQLNIPIISLTGSNGKTTTKELINAVISKKYNTTAT
KGNLNNHIGVPLTLLSMHADTEIGIVEMGANHQQEIAFLSNIAEPDYGYITNFGKAHLEG
FGGVEGVIKGKSELYDHLKTNAKCIFVNGDDPKQVERTQNTKKYTFGSTEGHDLKIEFVS
ADPMVKATVNDIEIQSQLIGSYNFSNIAAAIAMGMYFEVTLTDIKDAIEAYIPSNNRSQI
IHKNSNKIILDAYNANPTSMKAALDNFSNLSDTTKIAFLGDMFELGESAAAEHQFIHEYA
ASLQIDRIYLIGENFGITKSSNPNISIHITFESLKDQFPKEIQNSTLLIKGSRGMALERI
LELL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgattcaagatttatacgctaaatttcaacaacacccaatagcatctactgattctaga
aatattacacctaactgcatattctttgccttgaaaggtgacaattttaatggaaataaa
tatgctgaagatgcactgaaaaaaggcgctgcttttgcggttattgatgaatcagcatac
aaaaccagcgagcaaaccattctcgtagaaaatgtgttagaaacattgcaacaacttgct
agttaccatcgcaagcaattgaacattccgattatctcattaacaggaagcaatggcaaa
acaacgactaaagaactgatcaacgctgttatttcaaaaaaatacaacactactgcaacg
aaaggaaatttaaacaatcatattggcgtaccgcttaccttactttctatgcatgctgat
acagaaatcggaattgtagaaatgggcgcaaatcaccaacaagaaattgcctttttaagc
aatattgccgagccagattacggatatattaccaattttggaaaagcacacttagagggt
tttggcggtgtagaaggtgtcataaaaggaaaaagcgaactgtatgatcacttaaaaaca
aatgctaaatgtatctttgtcaatggtgacgatccaaaacaagttgagcgaacacaaaac
actaaaaaatatacctttggaagcaccgaaggacacgatttgaaaattgaattcgtaagt
gctgatccaatggtaaaagctactgtaaacgatattgaaattcagagccaactgattggt
tcttacaatttttcaaacattgcagcagccattgcaatgggaatgtattttgaagttaca
cttacggatataaaagacgctatagaagcatacattccttctaacaaccgatcgcaaatc
atacataaaaactctaataaaataattttagatgcttacaacgccaatcctacaagcatg
aaagctgccttggataatttttcaaacctcagcgataccactaaaattgcttttttaggt
gatatgtttgaacttggagaaagtgccgcagcagaacatcaattcatacatgaatacgca
gcctctttacaaattgatcgtatttatttaattggagaaaactttggcatcacaaaaagc
agcaatcccaacataagcattcacatcacttttgaatcgttaaaagatcaattcccaaaa
gaaatacaaaacagcacgttgttaatcaaaggttcgcgcggaatggcgttggaacgaatt
ttggagttgttataa
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