Kordia sp. SMS9: KORDIASMS9_00435
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Entry
KORDIASMS9_00435 CDS
T05562
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kos
Kordia sp. SMS9
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kos03032
]
KORDIASMS9_00435 (topA)
03400 DNA repair and recombination proteins [BR:
kos03400
]
KORDIASMS9_00435 (topA)
Enzymes [BR:
kos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KORDIASMS9_00435 (topA)
DNA replication proteins [BR:
kos03032
]
Prokaryotic type
DNA Topoisomerases
KORDIASMS9_00435 (topA)
DNA repair and recombination proteins [BR:
kos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KORDIASMS9_00435 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
PL28
DUF3271
Motif
Other DBs
NCBI-ProteinID:
AXG68242
UniProt:
A0A345GVA4
LinkDB
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Position
complement(463272..465779)
Genome browser
AA seq
835 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDYKVESSFGHIADLPSKELGVNVEGDFEPEYIVSDDK
KSVVKKLKDLAKKAEIVWLASDEDREGEAIAWHLAETLKLDPERTKRIVFHEITKTAIQK
AIQNPRDIDYNLVNAQQARRILDRLVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
SIQDFKPKASFKIAAEFTNSKGKKFKARLNKTFSTHQAAKDFLAKNVGADFKIANLETKP
AKKSPAAPFTTSTLQQEASRKLYFSVSKTMTLAQRLYEAGLITYMRTDSVNLSNDAKNAA
QEEIIRSYGEEYSHPRNYKSKAKGAQEAHEAIRPTNMENHSVDAEYDQVRLYELIWKRTV
ASQMSDAKLERTNAKIEANTHDERFTANGEVLKFEGFLKVYLEGKDDDDEEQDGMLPALF
IGESLTNEFISATQRYTKAPYRFTEASLVKQLEELGIGRPSTYAPTISTIQNRGYVEKGT
VEGVERKYEQLTLQGDKIIEKELTEKVGSDKGKLVPTDIGMIVNDFLVKNFASILDYNFT
AKVEQDFDDIASGNEKWKDMMKDFYKDFHPKVEDVKENAERESGERILGTDPDTGKQVSV
RLGKFGPMVQIGTVDDEEKPKFASLSPDQQLNTITYEEAMDLFQLPKTLGEYKGETVEVN
NGRYGPYVKFGKKFISLDKGEDPLSVEMDRAMELIVAREKADAPIANYEGHDVTKGVGRF
GPFLKWNGIFINVNKKYDFDNLSQADIEELIEDKKQKERDKIIHNWEEEGIRVEKARWGR
SNILKGKTKIELPKTVDATKLTLEEVQKIIEDKAPKKKTKAKAKAKPKSKAKAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatctggtaattgttgagtcacctgcaaaggcgaaaacaattgaaaaattt
cttggaaaagattacaaagtagaatctagttttggacacattgcagatctaccttccaaa
gaattgggcgtaaatgttgagggcgattttgaacctgaatatattgtctctgatgataaa
aaatcagtagtaaaaaaattaaaagacttagctaagaaagcagaaattgtttggcttgct
agtgatgaagatcgggaaggagaagccattgcgtggcatttggcagaaacgttaaagtta
gatccagaacgcacgaaacgcatcgtttttcatgaaattacgaaaacagccatccaaaaa
gcaattcaaaatccaagagatattgactacaacttagtcaacgcgcaacaagcacgaaga
atcttagacagattggtgggttacgaactttcacctgtattatggcgaaaagtaaaaggc
ggattgtctgccggacgtgtgcaatcggtttcagttcgtttaattgtagagcgcgaacgt
agcattcaagacttcaaaccaaaagcatcttttaaaattgccgctgaatttaccaactcg
aaagggaaaaaattcaaagccagacttaataaaacattttcaacgcatcaagctgctaaa
gatttcttggcgaaaaatgtaggtgccgattttaaaattgcaaacttagaaaccaagccc
gcaaaaaaatcaccagcagcgccatttactacatcaacactacaacaagaagcatcgcga
aagctctatttctcggtaagtaaaacaatgaccttggcgcaacgcttatatgaagctggt
ctaattacctatatgagaacagacagcgtgaatctttccaacgatgctaaaaatgcagca
caagaggaaatcatacgttcatacggagaagaatacagtcacccaagaaactacaaaagc
aaagcaaaaggtgcacaggaagcgcatgaggcaattcgtccgacaaacatggaaaaccat
tcggttgatgcagaatacgatcaagtgcgtttgtacgaattaatttggaaacgtaccgtt
gcgtcgcaaatgagtgatgcaaaactagaacgtaccaacgcaaaaatagaagccaatacg
catgacgaacgcttcacggcaaacggagaagtgttgaagtttgaaggtttcttaaaagta
tatttagaaggaaaagacgacgacgatgaagagcaagatggcatgttgccagcattattt
ataggtgaatcactaacgaacgaattcatcagcgccacacaacgctacaccaaagcacca
taccgatttacagaagcatctttggtaaaacaattagaagaattaggtattggacgacca
tctacatacgcgccaaccatttctaccattcaaaatagaggatatgtagaaaaaggaacc
gtggaaggtgttgaacggaaatacgaacaactcacgttgcaaggtgataaaatcatcgaa
aaagaactcacggaaaaagtaggttcagacaaagggaaactcgtgccaacagacattgga
atgattgtaaatgatttcttggtaaaaaatttcgcttctatcttagattataactttacc
gcaaaagtagagcaagattttgacgacatcgcttctggaaacgaaaagtggaaagacatg
atgaaggatttctacaaagattttcatccaaaagtagaagatgttaaagaaaatgccgaa
cgcgaatcaggcgaacgtatcttaggaaccgatccagacacgggcaaacaagtaagtgtg
cgactcggaaaatttggaccgatggtgcaaattggaacggttgacgatgaagaaaagcca
aaatttgccagtctcagtcccgatcagcaactaaatacaatcacctacgaagaagccatg
gatttattccaattgccaaaaacgttgggcgaatacaaaggcgaaacggttgaggtaaac
aacggtcgttatggtccgtatgtgaaatttggtaaaaaattcatttcgttagataaagga
gaagatccactcagtgtggaaatggacagagcgatggaattgatcgttgcgcgtgaaaaa
gcagatgcgcctattgcaaattacgaaggtcatgatgtgaccaaaggtgtaggacgcttt
ggacctttcctcaaatggaatggcatctttatcaatgtgaataaaaaatacgatttcgac
aatctttcacaagctgatattgaagaattgatagaagataaaaagcaaaaagagcgcgat
aaaatcatccataactgggaagaagaaggcattcgtgtggaaaaagcgcgttggggacga
agtaacatcctcaaaggaaaaacaaaaatagaacttccaaaaacggtggatgctaccaaa
ttgacgttagaagaagttcaaaaaataatagaggacaaagcaccaaagaaaaaaaccaaa
gcaaaagcaaaggcaaaaccgaaaagcaaagcaaaagctaaaaaataa
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