Kordia sp. SMS9: KORDIASMS9_00462
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Entry
KORDIASMS9_00462 CDS
T05562
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
kos
Kordia sp. SMS9
Pathway
kos00550
Peptidoglycan biosynthesis
kos01100
Metabolic pathways
kos01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KORDIASMS9_00462 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KORDIASMS9_00462 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kos01011
]
KORDIASMS9_00462 (mrdA)
Enzymes [BR:
kos01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KORDIASMS9_00462 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
kos01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KORDIASMS9_00462 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF5770
Motif
Other DBs
NCBI-ProteinID:
AXG68269
UniProt:
A0A345GVD1
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Position
498980..500863
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AA seq
627 aa
AA seq
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MRKLLLYLIVISVGLIYTGRLSYLQLFNDVEVATNFLNDSAIKTEYTYPERGYVYDRNGT
LLVANQPSYDVMVIPREVKEFNKAEFCKLLRITEEEFATKLEKAKKHSWRVPSVFVAQMA
KRDYAYLQEKMHRFKGFYIQKRSIRNYQTDHGANVLGFISEVDDRDLKKNPYYQSGELIG
RTGIEKSYENELRGVKGVKRIQKDIHNKVIGSYENGRLDTLPVNGKDIQITLDAKLQAYG
EQLMVNKRGGIVAIEPSSGEILALVSAPSYDPDLLVGRQRSKNYSAMHYDSIRKPMYDRG
LLAQYAPGSPFKTLNALVALQEGVITTQTTYTCRSGYYYGRSGRKMGCHCGSGKRNVING
VAKSCNAYFANAYRQIISKYDSPREGMNVWSDHIKSFGLGDYFGNDLSTGRKGRIPTGDY
YTNNYFKHDKWHVLNTISNAIGQGQVELTPIQLANMTAAIANRGHYFTPHIIKKINGVSI
NNPHFTEPKHTTIDKQHFEPVIQGMHDVFSMKKGGTARWLNVPGIEICGKTGTAENFIKI
DGERTQLTDHSIFVAFAPKDNPKIAIAVFVENGYYGARWAGKISSLMIEQYLKGEISLKA
MEKLVLEKSLEEEYAKPLSGEPFTINE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaactgttgttataccttattgtaatctctgttggactcatctatacaggacgt
ctctcctatttgcaattattcaatgatgtagaagttgccactaatttcttaaatgatagt
gctatcaaaacagaatatacctatcctgaacgcggttatgtatacgatagaaacggaaca
ttgctcgttgccaaccaaccgtcgtatgatgtcatggtcattccacgcgaggtgaaagaa
ttcaacaaagcggaattttgcaaactattgcgcattacggaagaagaattcgccacaaaa
ttagaaaaagctaaaaaacactcttggcgtgttccatcggtgtttgtcgcacaaatggca
aagcgcgattacgcatatcttcaagaaaaaatgcatcgttttaaaggtttttacattcaa
aaacgttccattcgtaactaccaaaccgatcacggcgccaatgtgttagggtttatcagc
gaagtagacgatcgtgatttaaaaaagaatccatattaccaatctggcgaattgattggt
cgtacaggcattgaaaagtcgtatgaaaacgaattgcgcggcgtcaaaggtgtgaagcgc
attcaaaaagacatccacaacaaggtgattggttcttatgaaaatgggcgtttagacaca
cttcccgtgaacggaaaagacattcaaatcacgcttgacgcgaaattacaagcatacggc
gaacaattaatggttaacaaacgcggcggcattgtcgcaattgaaccttcttcgggagaa
atattagccttggtttctgcaccaagttacgatcctgatctgttggttggtcgtcaacgt
tccaagaattacagtgccatgcattatgattctatcagaaaaccaatgtatgacagaggt
ttgttagcacaatacgcgcctggttcgccatttaaaaccttaaatgcattagtagcactg
caagaaggtgtgattacgacacaaacaacctacacgtgtcgtagtggctattattacggc
agaagcggacgaaaaatgggctgtcactgtggaagcggaaagcgaaatgtaatcaatgga
gtagcaaaatcctgtaatgcgtactttgccaatgcatatcgacaaatcatcagcaaatac
gattcgccacgagaaggcatgaatgtttggagtgatcatatcaaaagttttggtttgggc
gactattttggcaatgacttatctacaggacgtaaaggacgcattccgacaggagattat
tatacaaacaattattttaagcatgacaaatggcacgttctcaacactatttccaatgct
attggacaaggacaagtagaattgacgccgattcaattggcaaatatgaccgcagcaatt
gccaacagaggacattattttacgccacacatcatcaaaaaaattaatggagtatctata
aataatccacattttacggaaccaaaacacacaactattgacaagcaacattttgaacct
gtgattcaaggaatgcacgatgtattcagtatgaaaaaaggtggaaccgctcgttggcta
aatgttcctggaattgaaatttgtggaaaaacaggaacggcagaaaactttatcaaaatt
gatggcgaacgaacacaactgaccgatcattcaatttttgtggcgtttgctccaaaagat
aatcctaagattgccattgcggtttttgtagaaaacggttattatggagcgcgttgggca
ggaaaaatttctagcttaatgattgagcaatatctcaaaggcgaaattagcttgaaagct
atggaaaagttagtcttagagaagagtttggaagaagaatatgcaaagccactaagtgga
gaaccatttaccatcaatgagtag
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