Kordia sp. SMS9: KORDIASMS9_00645
Help
Entry
KORDIASMS9_00645 CDS
T05562
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kos
Kordia sp. SMS9
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kos03016
]
KORDIASMS9_00645 (truB)
Enzymes [BR:
kos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KORDIASMS9_00645 (truB)
Transfer RNA biogenesis [BR:
kos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KORDIASMS9_00645 (truB)
Prokaryotic type
KORDIASMS9_00645 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AXG68430
LinkDB
All DBs
Position
688918..689616
Genome browser
AA seq
232 aa
AA seq
DB search
MKTLEAYQAGQTLLIDKPLNWSSFQAVNKVKLALKSAYKIKKLKVGHAGTLDPLATGLLV
ICVGKDTKKIANYQGQAKEYTGTITVGGTTPSYDLESDINETFSTEHITHELIHEATQQF
LGEIDQKPPIFSALKKDGKRLYELARAGEEVDIPTRKITINEFEITRIALPEIDFRVVCS
KGTYIRSLAHDFGKSLNSGAHLSALRRTKIGDFDVKDAISPDVFGDSLRVGK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgctcgaagcataccaagccggacaaaccttattgattgacaaaccattgaat
tggtcgtcatttcaagcggtcaacaaagtgaaattagccttaaaatctgcgtataagatc
aaaaagttaaaagtaggacatgcaggtactttagatccgttagcaacaggcttgttggtt
atttgtgttggaaaagacacgaagaaaattgctaattatcaagggcaagccaaagaatat
acaggaacaattaccgttggcggaactacaccatcgtacgatttagaaagcgacatcaac
gaaaccttttcaacggaacatattacgcatgaattgattcatgaagcgacacaacaattt
ttaggcgaaattgatcaaaaaccaccaatattttccgcattaaaaaaagatggaaaacgc
ttgtatgaattggcacgtgctggcgaagaagtagacattccaacacgtaaaattacgatt
aacgaatttgaaattacacgtattgctttgcctgaaattgattttcgagttgtttgcagc
aaaggaacctacattcgttcgttggcgcatgatttcggaaaatccttgaattctggtgca
catttatctgccttgcgtcgtacaaaaattggagactttgatgtaaaggatgcgatttct
ccagatgtttttggagacagtttgcgagttggtaagtag
DBGET
integrated database retrieval system
