Kordia sp. SMS9: KORDIASMS9_01175
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Entry
KORDIASMS9_01175 CDS
T05562
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
kos
Kordia sp. SMS9
Pathway
kos00521
Streptomycin biosynthesis
kos00523
Polyketide sugar unit biosynthesis
kos00525
Acarbose and validamycin biosynthesis
kos00541
Biosynthesis of various nucleotide sugars
kos01100
Metabolic pathways
kos01110
Biosynthesis of secondary metabolites
kos01250
Biosynthesis of nucleotide sugars
Module
kos_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KORDIASMS9_01175 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KORDIASMS9_01175 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
KORDIASMS9_01175 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KORDIASMS9_01175 (rfbB)
00525 Acarbose and validamycin biosynthesis
KORDIASMS9_01175 (rfbB)
Enzymes [BR:
kos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KORDIASMS9_01175 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
NAD_binding_10
KR
NmrA
Motif
Other DBs
NCBI-ProteinID:
AXG68956
UniProt:
A0A345GXB8
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All DBs
Position
1302200..1303219
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AA seq
339 aa
AA seq
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MSKNAVLITGGAGFIGANYIPYFLEQHQDTTVVNIDKLTYAGDLANLSAISNHKNYHFIK
GDICDRNLIEQLFKTHDFKAVIHFAAESHVDNSIKNPDAFIQTNIFGTFNLLDVAKKHWM
DGPNQVKPGCEACRFHHISTDEVYGTLGETGLFTEDTSYAPNSPYSASKASSDFIVRSYF
HTYGMNVVTTNCSNNYGPKQHDEKLIPTIIRKAVSGEQIPIYGDGMNIRDWLYVLDHCKG
IHLVYQTGKAGETYNIGGRNERTNMYIANTICELLDKLRPKETSYKAQISFVTDRPGHDF
RYAIDASKIENELGWKAAENFESGILKTIEWYLKKYETK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatgccgtacttattactggaggagcaggatttataggagcaaactatatt
ccgtatttcttggagcaacaccaagacaccacagtagtaaatattgacaagcttacgtat
gctggcgatttggcaaatttatcagcaatcagcaatcataaaaactatcactttataaaa
ggtgatatttgcgatcgaaatttgattgagcaattgtttaaaacacacgattttaaagca
gttattcactttgccgcagaatcacatgtagacaactctatcaaaaatccagatgcgttt
atacaaacaaatatctttggaaccttcaatctattagatgtcgccaaaaaacattggatg
gatggaccgaatcaagtaaaaccaggttgtgaagcttgccgttttcatcacatctcaaca
gatgaggtatacggaacgctgggcgaaacaggtttgtttacggaagacacatcctacgca
ccaaacagtccgtacagtgcttccaaagcatcgtctgattttattgtgcgcagttacttt
cacacctacggaatgaatgtggtaacgacaaattgctctaataattacggaccgaaacaa
catgatgaaaagttgattccaaccatcattcgcaaagcggtttcaggagagcaaattcct
atctatggcgacggaatgaacattcgcgattggttatacgtgttagatcattgcaaagga
attcatctcgtatatcaaacaggaaaagctggcgaaacctacaatattggtggacgaaac
gaacgtaccaatatgtacattgccaacacaatttgtgaactattagacaaattacgtccc
aaagaaacctcttacaaagcacaaattagttttgtgactgaccgacctggacacgatttt
cgctacgccattgatgccagcaaaatagaaaatgaactcggttggaaagccgcagaaaac
tttgaatcgggcattttaaaaacaattgaatggtatttaaaaaaatacgaaacaaaataa
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